De novo construction of a “Gene-space” for diploid plant genome rich in repetitive sequences by an iterative Process of Extraction and Assembly of NGS reads (iPEA protocol) with limited computing resources

BACKGROUND: The continuing increase in size and quality of the “short reads” raw data is a significant help for the quality of the assembly obtained through various bioinformatics tools. However, building a reference genome sequence for most plant species remains a significant challenge due to the l...

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Detalles Bibliográficos
Autores principales: Aluome, Christelle, Aubert, Grégoire, Alves Carvalho, Susete, Le Paslier, Marie-Christine, Burstin, Judith, Brunel, Dominique
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Technical Note
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750290/
https://www.ncbi.nlm.nih.gov/pubmed/26864345
http://dx.doi.org/10.1186/s13104-016-1903-z

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750290/
https://www.ncbi.nlm.nih.gov/pubmed/26864345
http://dx.doi.org/10.1186/s13104-016-1903-z

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