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Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin

[Image: see text] Heme-copper oxidases (HCOs) catalyze efficient reduction of oxygen to water in biological respiration. Despite progress in studying native enzymes and their models, the roles of non-covalent interactions in promoting this activity are still not well understood. Here we report EPR s...

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Autores principales: Petrik, Igor D., Davydov, Roman, Ross, Matthew, Zhao, Xuan, Hoffman, Brian, Lu, Yi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2015
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750474/
https://www.ncbi.nlm.nih.gov/pubmed/26716352
http://dx.doi.org/10.1021/jacs.5b12004
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author Petrik, Igor D.
Davydov, Roman
Ross, Matthew
Zhao, Xuan
Hoffman, Brian
Lu, Yi
author_facet Petrik, Igor D.
Davydov, Roman
Ross, Matthew
Zhao, Xuan
Hoffman, Brian
Lu, Yi
author_sort Petrik, Igor D.
collection PubMed
description [Image: see text] Heme-copper oxidases (HCOs) catalyze efficient reduction of oxygen to water in biological respiration. Despite progress in studying native enzymes and their models, the roles of non-covalent interactions in promoting this activity are still not well understood. Here we report EPR spectroscopic studies of cryoreduced oxy-F33Y-Cu(B)Mb, a functional model of HCOs engineered in myoglobin (Mb). We find that cryoreduction at 77 K of the O(2)-bound form, trapped in the conformation of the parent oxyferrous form, displays a ferric-hydroperoxo EPR signal, in contrast to the cryoreduced oxy-wild-type (WT) Mb, which is unable to deliver a proton and shows a signal from the peroxo-ferric state. Crystallography of oxy-F33Y-Cu(B)Mb reveals an extensive H-bond network involving H(2)O molecules, which is absent from oxy-WTMb. This H-bonding proton-delivery network is the key structural feature that transforms the reversible oxygen-binding protein, WTMb, into F33Y-Cu(B)Mb, an oxygen-activating enzyme that reduces O(2) to H(2)O. These results provide direct evidence of the importance of H-bond networks involving H(2)O in conferring enzymatic activity to a designed protein. Incorporating such extended H-bond networks in designing other metalloenzymes may allow us to confer and fine-tune their enzymatic activities.
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spelling pubmed-47504742016-12-30 Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin Petrik, Igor D. Davydov, Roman Ross, Matthew Zhao, Xuan Hoffman, Brian Lu, Yi J Am Chem Soc [Image: see text] Heme-copper oxidases (HCOs) catalyze efficient reduction of oxygen to water in biological respiration. Despite progress in studying native enzymes and their models, the roles of non-covalent interactions in promoting this activity are still not well understood. Here we report EPR spectroscopic studies of cryoreduced oxy-F33Y-Cu(B)Mb, a functional model of HCOs engineered in myoglobin (Mb). We find that cryoreduction at 77 K of the O(2)-bound form, trapped in the conformation of the parent oxyferrous form, displays a ferric-hydroperoxo EPR signal, in contrast to the cryoreduced oxy-wild-type (WT) Mb, which is unable to deliver a proton and shows a signal from the peroxo-ferric state. Crystallography of oxy-F33Y-Cu(B)Mb reveals an extensive H-bond network involving H(2)O molecules, which is absent from oxy-WTMb. This H-bonding proton-delivery network is the key structural feature that transforms the reversible oxygen-binding protein, WTMb, into F33Y-Cu(B)Mb, an oxygen-activating enzyme that reduces O(2) to H(2)O. These results provide direct evidence of the importance of H-bond networks involving H(2)O in conferring enzymatic activity to a designed protein. Incorporating such extended H-bond networks in designing other metalloenzymes may allow us to confer and fine-tune their enzymatic activities. American Chemical Society 2015-12-30 2016-02-03 /pmc/articles/PMC4750474/ /pubmed/26716352 http://dx.doi.org/10.1021/jacs.5b12004 Text en Copyright © 2015 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes.
spellingShingle Petrik, Igor D.
Davydov, Roman
Ross, Matthew
Zhao, Xuan
Hoffman, Brian
Lu, Yi
Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
title Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
title_full Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
title_fullStr Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
title_full_unstemmed Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
title_short Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
title_sort spectroscopic and crystallographic evidence for the role of a water-containing h-bond network in oxidase activity of an engineered myoglobin
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750474/
https://www.ncbi.nlm.nih.gov/pubmed/26716352
http://dx.doi.org/10.1021/jacs.5b12004
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