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Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin
[Image: see text] Heme-copper oxidases (HCOs) catalyze efficient reduction of oxygen to water in biological respiration. Despite progress in studying native enzymes and their models, the roles of non-covalent interactions in promoting this activity are still not well understood. Here we report EPR s...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750474/ https://www.ncbi.nlm.nih.gov/pubmed/26716352 http://dx.doi.org/10.1021/jacs.5b12004 |
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author | Petrik, Igor D. Davydov, Roman Ross, Matthew Zhao, Xuan Hoffman, Brian Lu, Yi |
author_facet | Petrik, Igor D. Davydov, Roman Ross, Matthew Zhao, Xuan Hoffman, Brian Lu, Yi |
author_sort | Petrik, Igor D. |
collection | PubMed |
description | [Image: see text] Heme-copper oxidases (HCOs) catalyze efficient reduction of oxygen to water in biological respiration. Despite progress in studying native enzymes and their models, the roles of non-covalent interactions in promoting this activity are still not well understood. Here we report EPR spectroscopic studies of cryoreduced oxy-F33Y-Cu(B)Mb, a functional model of HCOs engineered in myoglobin (Mb). We find that cryoreduction at 77 K of the O(2)-bound form, trapped in the conformation of the parent oxyferrous form, displays a ferric-hydroperoxo EPR signal, in contrast to the cryoreduced oxy-wild-type (WT) Mb, which is unable to deliver a proton and shows a signal from the peroxo-ferric state. Crystallography of oxy-F33Y-Cu(B)Mb reveals an extensive H-bond network involving H(2)O molecules, which is absent from oxy-WTMb. This H-bonding proton-delivery network is the key structural feature that transforms the reversible oxygen-binding protein, WTMb, into F33Y-Cu(B)Mb, an oxygen-activating enzyme that reduces O(2) to H(2)O. These results provide direct evidence of the importance of H-bond networks involving H(2)O in conferring enzymatic activity to a designed protein. Incorporating such extended H-bond networks in designing other metalloenzymes may allow us to confer and fine-tune their enzymatic activities. |
format | Online Article Text |
id | pubmed-4750474 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-47504742016-12-30 Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin Petrik, Igor D. Davydov, Roman Ross, Matthew Zhao, Xuan Hoffman, Brian Lu, Yi J Am Chem Soc [Image: see text] Heme-copper oxidases (HCOs) catalyze efficient reduction of oxygen to water in biological respiration. Despite progress in studying native enzymes and their models, the roles of non-covalent interactions in promoting this activity are still not well understood. Here we report EPR spectroscopic studies of cryoreduced oxy-F33Y-Cu(B)Mb, a functional model of HCOs engineered in myoglobin (Mb). We find that cryoreduction at 77 K of the O(2)-bound form, trapped in the conformation of the parent oxyferrous form, displays a ferric-hydroperoxo EPR signal, in contrast to the cryoreduced oxy-wild-type (WT) Mb, which is unable to deliver a proton and shows a signal from the peroxo-ferric state. Crystallography of oxy-F33Y-Cu(B)Mb reveals an extensive H-bond network involving H(2)O molecules, which is absent from oxy-WTMb. This H-bonding proton-delivery network is the key structural feature that transforms the reversible oxygen-binding protein, WTMb, into F33Y-Cu(B)Mb, an oxygen-activating enzyme that reduces O(2) to H(2)O. These results provide direct evidence of the importance of H-bond networks involving H(2)O in conferring enzymatic activity to a designed protein. Incorporating such extended H-bond networks in designing other metalloenzymes may allow us to confer and fine-tune their enzymatic activities. American Chemical Society 2015-12-30 2016-02-03 /pmc/articles/PMC4750474/ /pubmed/26716352 http://dx.doi.org/10.1021/jacs.5b12004 Text en Copyright © 2015 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Petrik, Igor D. Davydov, Roman Ross, Matthew Zhao, Xuan Hoffman, Brian Lu, Yi Spectroscopic and Crystallographic Evidence for the Role of a Water-Containing H-Bond Network in Oxidase Activity of an Engineered Myoglobin |
title | Spectroscopic
and Crystallographic Evidence for the
Role of a Water-Containing H-Bond Network in Oxidase Activity
of an Engineered Myoglobin |
title_full | Spectroscopic
and Crystallographic Evidence for the
Role of a Water-Containing H-Bond Network in Oxidase Activity
of an Engineered Myoglobin |
title_fullStr | Spectroscopic
and Crystallographic Evidence for the
Role of a Water-Containing H-Bond Network in Oxidase Activity
of an Engineered Myoglobin |
title_full_unstemmed | Spectroscopic
and Crystallographic Evidence for the
Role of a Water-Containing H-Bond Network in Oxidase Activity
of an Engineered Myoglobin |
title_short | Spectroscopic
and Crystallographic Evidence for the
Role of a Water-Containing H-Bond Network in Oxidase Activity
of an Engineered Myoglobin |
title_sort | spectroscopic
and crystallographic evidence for the
role of a water-containing h-bond network in oxidase activity
of an engineered myoglobin |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4750474/ https://www.ncbi.nlm.nih.gov/pubmed/26716352 http://dx.doi.org/10.1021/jacs.5b12004 |
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