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Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing

BACKGROUND: Schizophrenia (SCZ) is a severe, debilitating, and complex psychiatric disorder with multiple causative factors. An increasing number of studies have determined that rare variations play an important role in its etiology. A somatic mutation is a rare form of genetic variation that occurs...

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Autores principales: Lyu, Nan, Guan, Li-Li, Ma, Hong, Wang, Xi-Jin, Wu, Bao-Ming, Shang, Fan-Hong, Wang, Dan, Wen, Hong, Yu, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Medknow Publications & Media Pvt Ltd 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4804415/
https://www.ncbi.nlm.nih.gov/pubmed/26960372
http://dx.doi.org/10.4103/0366-6999.178009
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author Lyu, Nan
Guan, Li-Li
Ma, Hong
Wang, Xi-Jin
Wu, Bao-Ming
Shang, Fan-Hong
Wang, Dan
Wen, Hong
Yu, Xin
author_facet Lyu, Nan
Guan, Li-Li
Ma, Hong
Wang, Xi-Jin
Wu, Bao-Ming
Shang, Fan-Hong
Wang, Dan
Wen, Hong
Yu, Xin
author_sort Lyu, Nan
collection PubMed
description BACKGROUND: Schizophrenia (SCZ) is a severe, debilitating, and complex psychiatric disorder with multiple causative factors. An increasing number of studies have determined that rare variations play an important role in its etiology. A somatic mutation is a rare form of genetic variation that occurs at an early stage of embryonic development and is thought to contribute substantially to the development of SCZ. The aim of the study was to explore the novel pathogenic somatic single nucleotide variations (SNVs) and somatic insertions and deletions (indels) of SCZ. METHODS: One Chinese family with a monozygotic (MZ) twin pair discordant for SCZ was included. Whole exome sequencing was performed in the co-twin and their parents. Rigorous filtering processes were conducted to prioritize pathogenic somatic variations, and all identified SNVs and indels were further confirmed by Sanger sequencing. RESULTS: One somatic SNV and two somatic indels were identified after rigorous selection processes. However, none was validated by Sanger sequencing. CONCLUSIONS: This study is not alone in the failure to identify pathogenic somatic variations in MZ twins, suggesting that exonic somatic variations are extremely rare. Further efforts are warranted to explore the potential genetic mechanism of SCZ.
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spelling pubmed-48044152016-04-04 Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing Lyu, Nan Guan, Li-Li Ma, Hong Wang, Xi-Jin Wu, Bao-Ming Shang, Fan-Hong Wang, Dan Wen, Hong Yu, Xin Chin Med J (Engl) Original Article BACKGROUND: Schizophrenia (SCZ) is a severe, debilitating, and complex psychiatric disorder with multiple causative factors. An increasing number of studies have determined that rare variations play an important role in its etiology. A somatic mutation is a rare form of genetic variation that occurs at an early stage of embryonic development and is thought to contribute substantially to the development of SCZ. The aim of the study was to explore the novel pathogenic somatic single nucleotide variations (SNVs) and somatic insertions and deletions (indels) of SCZ. METHODS: One Chinese family with a monozygotic (MZ) twin pair discordant for SCZ was included. Whole exome sequencing was performed in the co-twin and their parents. Rigorous filtering processes were conducted to prioritize pathogenic somatic variations, and all identified SNVs and indels were further confirmed by Sanger sequencing. RESULTS: One somatic SNV and two somatic indels were identified after rigorous selection processes. However, none was validated by Sanger sequencing. CONCLUSIONS: This study is not alone in the failure to identify pathogenic somatic variations in MZ twins, suggesting that exonic somatic variations are extremely rare. Further efforts are warranted to explore the potential genetic mechanism of SCZ. Medknow Publications & Media Pvt Ltd 2016-03-20 /pmc/articles/PMC4804415/ /pubmed/26960372 http://dx.doi.org/10.4103/0366-6999.178009 Text en Copyright: © 2016 Chinese Medical Journal http://creativecommons.org/licenses/by-nc-sa/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 3.0 License, which allows others to remix, tweak, and build upon the work non-commercially, as long as the author is credited and the new creations are licensed under the identical terms.
spellingShingle Original Article
Lyu, Nan
Guan, Li-Li
Ma, Hong
Wang, Xi-Jin
Wu, Bao-Ming
Shang, Fan-Hong
Wang, Dan
Wen, Hong
Yu, Xin
Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing
title Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing
title_full Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing
title_fullStr Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing
title_full_unstemmed Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing
title_short Failure to Identify Somatic Mutations in Monozygotic Twins Discordant for Schizophrenia by Whole Exome Sequencing
title_sort failure to identify somatic mutations in monozygotic twins discordant for schizophrenia by whole exome sequencing
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4804415/
https://www.ncbi.nlm.nih.gov/pubmed/26960372
http://dx.doi.org/10.4103/0366-6999.178009
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