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Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension
BACKGROUND: Essential hypertension is a significant risk factor for cardiovascular diseases. Emerging research suggests a role of DNA methylation in blood pressure physiology. We aimed to investigate epigenetic associations of promoter related CpG sites to essential hypertension in a genome-wide met...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4841955/ https://www.ncbi.nlm.nih.gov/pubmed/27105587 http://dx.doi.org/10.1186/s12920-016-0180-y |
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author | Boström, Adrian E. Mwinyi, Jessica Voisin, Sarah Wu, Wenting Schultes, Bernd Zhang, Kang Schiöth, Helgi B. |
author_facet | Boström, Adrian E. Mwinyi, Jessica Voisin, Sarah Wu, Wenting Schultes, Bernd Zhang, Kang Schiöth, Helgi B. |
author_sort | Boström, Adrian E. |
collection | PubMed |
description | BACKGROUND: Essential hypertension is a significant risk factor for cardiovascular diseases. Emerging research suggests a role of DNA methylation in blood pressure physiology. We aimed to investigate epigenetic associations of promoter related CpG sites to essential hypertension in a genome-wide methylation approach. METHODS: The genome-wide methylation pattern in whole blood was measured in 11 obese patients before and six months after Roux-en-Y gastric bypass surgery using the Illumina 450 k beadchip. CpG sites located within 1500 bp of the transcriptional start site of adjacent genes were included in our study, resulting in 124 199 probes investigated in the subsequent analysis. Percent changes in methylation states and SBP measured before and six months after surgery were calculated. These parameters were correlated to each other using the Spearman’s rank correlation method (Edgeworth series approximation). To further investigate the detected relationship between candidate CpG sites and systolic blood pressure levels, binary logistic regression analyses were performed in a larger and independent cohort of 539 individuals aged 19–101 years to elucidate a relationship between EH and the methylation state in candidate CpG sites. RESULTS: We identified 24 promoter associated CpG sites that correlated with change in SBP after RYGB surgery (p < 10(−16)). Two of these CpG loci (cg00875989, cg09134341) were significantly hypomethylated in dependency of EH (p < 10(−03)). These results were independent of age, BMI, ethnicity and sex. CONCLUSIONS: The identification of these novel CpG sites may contribute to a further understanding of the epigenetic regulatory mechanisms underlying the development of essential hypertension. |
format | Online Article Text |
id | pubmed-4841955 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-48419552016-04-24 Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension Boström, Adrian E. Mwinyi, Jessica Voisin, Sarah Wu, Wenting Schultes, Bernd Zhang, Kang Schiöth, Helgi B. BMC Med Genomics Research Article BACKGROUND: Essential hypertension is a significant risk factor for cardiovascular diseases. Emerging research suggests a role of DNA methylation in blood pressure physiology. We aimed to investigate epigenetic associations of promoter related CpG sites to essential hypertension in a genome-wide methylation approach. METHODS: The genome-wide methylation pattern in whole blood was measured in 11 obese patients before and six months after Roux-en-Y gastric bypass surgery using the Illumina 450 k beadchip. CpG sites located within 1500 bp of the transcriptional start site of adjacent genes were included in our study, resulting in 124 199 probes investigated in the subsequent analysis. Percent changes in methylation states and SBP measured before and six months after surgery were calculated. These parameters were correlated to each other using the Spearman’s rank correlation method (Edgeworth series approximation). To further investigate the detected relationship between candidate CpG sites and systolic blood pressure levels, binary logistic regression analyses were performed in a larger and independent cohort of 539 individuals aged 19–101 years to elucidate a relationship between EH and the methylation state in candidate CpG sites. RESULTS: We identified 24 promoter associated CpG sites that correlated with change in SBP after RYGB surgery (p < 10(−16)). Two of these CpG loci (cg00875989, cg09134341) were significantly hypomethylated in dependency of EH (p < 10(−03)). These results were independent of age, BMI, ethnicity and sex. CONCLUSIONS: The identification of these novel CpG sites may contribute to a further understanding of the epigenetic regulatory mechanisms underlying the development of essential hypertension. BioMed Central 2016-04-22 /pmc/articles/PMC4841955/ /pubmed/27105587 http://dx.doi.org/10.1186/s12920-016-0180-y Text en © Boström et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Boström, Adrian E. Mwinyi, Jessica Voisin, Sarah Wu, Wenting Schultes, Bernd Zhang, Kang Schiöth, Helgi B. Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension |
title | Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension |
title_full | Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension |
title_fullStr | Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension |
title_full_unstemmed | Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension |
title_short | Longitudinal genome-wide methylation study of Roux-en-Y gastric bypass patients reveals novel CpG sites associated with essential hypertension |
title_sort | longitudinal genome-wide methylation study of roux-en-y gastric bypass patients reveals novel cpg sites associated with essential hypertension |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4841955/ https://www.ncbi.nlm.nih.gov/pubmed/27105587 http://dx.doi.org/10.1186/s12920-016-0180-y |
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