ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data

BACKGROUND: Detection of tandem duplication within coding exons, referred to as internal tandem duplication (ITD), remains challenging due to inefficiencies in alignment of ITD-containing reads to the reference genome. There is a critical need to develop efficient methods to recover these important...

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Detalles Bibliográficos
Autores principales: Rustagi, Navin, Hampton, Oliver A, Li, Jie, Xi, Liu, Gibbs, Richard A., Plon, Sharon E., Kimmel, Marek, Wheeler, David A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4847212/
https://www.ncbi.nlm.nih.gov/pubmed/27121965
http://dx.doi.org/10.1186/s12859-016-1031-8

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4847212/
https://www.ncbi.nlm.nih.gov/pubmed/27121965
http://dx.doi.org/10.1186/s12859-016-1031-8

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