OEFinder: a user interface to identify and visualize ordering effects in single-cell RNA-seq data

Summary: A recent article identified an artifact in multiple single-cell RNA-seq (scRNA-seq) datasets generated by the Fluidigm C1 platform. Specifically, Leng et al. showed significantly increased gene expression in cells captured from sites with small or large plate output IDs. We refer to this ar...

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Detalles Bibliográficos
Autores principales: Leng, Ning, Choi, Jeea, Chu, Li-Fang, Thomson, James A., Kendziorski, Christina, Stewart, Ron
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Applications Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848403/
https://www.ncbi.nlm.nih.gov/pubmed/26743507
http://dx.doi.org/10.1093/bioinformatics/btw004

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4848403/
https://www.ncbi.nlm.nih.gov/pubmed/26743507
http://dx.doi.org/10.1093/bioinformatics/btw004

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