Cargando…

Validation of a DNA methylation microarray for 850,000 CpG sites of the human genome enriched in enhancer sequences

AIM: DNA methylation is the best known epigenetic mark. Cancer and other pathologies show an altered DNA methylome. However, delivering complete DNA methylation maps is compromised by the price and labor-intensive interpretation of single nucleotide methods. MATERIAL & METHODS: Following the suc...

Descripción completa

Detalles Bibliográficos
Autores principales:	Moran, Sebastian, Arribas, Carles, Esteller, Manel
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Future Medicine Ltd 2016
Materias:	Special Report
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4864062/ https://www.ncbi.nlm.nih.gov/pubmed/26673039 http://dx.doi.org/10.2217/epi.15.114

Ejemplares similares

The Impact of 850,000 Years of Climate Changes on the Structure and Dynamics of Mammal Food Webs
por: Nenzén, Hedvig K., et al.
Publicado: (2014)

Validation of a DNA methylation microarray for 285,000 CpG sites in the mouse genome
por: Garcia-Prieto, Carlos A., et al.
Publicado: (2022)

Deoxyribonucleic acid methylation profiling of single human blastocysts by methylated CpG-island amplification coupled with CpG-island microarray
por: Huntriss, John, et al.
Publicado: (2015)

Evaluation of single CpG sites as proxies of CpG island methylation states at the genome scale
por: Barrera, Víctor, et al.
Publicado: (2012)

CpG Methylation in Aging: Trajectories of Individual Sites
por: Meer, Margarita, et al.
Publicado: (2020)

Preservation of methylated CpG dinucleotides in human CpG islands
por: Panchin, Alexander Y., et al.
Publicado: (2016)

Stabilization Effect of Intrinsically Disordered Regions on Multidomain Proteins: The Case of the Methyl-CpG Protein 2, MeCP2
por: Ortega-Alarcon, David, et al.
Publicado: (2021)

Cytosine methylation at CpCpG sites triggers accumulation of non-CpG methylation in gene bodies
por: Zabet, Nicolae Radu, et al.
Publicado: (2017)

Methyl CpG binding protein 2 (MeCP2) enhances photodimer formation at methyl-CpG sites but suppresses dimer deamination
por: Cannistraro, Vincent J., et al.
Publicado: (2010)

A Role for Methyl-CpG Binding Domain Protein 2 in the Modulation of the Estrogen Response of pS2/TFF1 Gene
por: Chatagnon, Amandine, et al.
Publicado: (2010)

Factors to preserve CpG-rich sequences in methylated CpG islands
por: Miyahara, Hiroki, et al.
Publicado: (2015)

Epigenetic inheritance is unfaithful at intermediately methylated CpG sites
por: Hay, Amir D., et al.
Publicado: (2023)

CpG island hypermethylation-associated silencing of small nucleolar RNAs in human cancer
por: Ferreira, Humberto J., et al.
Publicado: (2012)

The Effects of O(6)-methyl Guanine DNA-methyl Transferase Promotor Methylation and CpG1, CpG2, CpG3 and CpG4 Methylation on Treatment Response and their Prognostic Significance in Patients with Glioblastoma
por: Yildiz, OG, et al.
Publicado: (2020)

Substitution rate variation at human CpG sites correlates with non-CpG divergence, methylation level and GC content
por: Mugal, Carina F, et al.
Publicado: (2011)

In Vivo Control of CpG and Non-CpG DNA Methylation by DNA Methyltransferases
por: Arand, Julia, et al.
Publicado: (2012)

CpG and Non-CpG Methylation in Epigenetic Gene Regulation and Brain Function
por: Jang, Hyun Sik, et al.
Publicado: (2017)

Circular RNA CpG island hypermethylation-associated silencing in human cancer
por: Ferreira, Humberto J., et al.
Publicado: (2018)

Identification of DNA hypermethylation of SOX9 in association with bladder cancer progression using CpG microarrays
por: Aleman, A, et al.
Publicado: (2008)

CpG Methylation Altered the Stability and Structure of the i-Motifs Located in the CpG Islands
por: Oshikawa, Daiki, et al.
Publicado: (2022)

A novel method to quantify local CpG methylation density by regional methylation elongation assay on microarray
por: Zhang, Dingdong, et al.
Publicado: (2008)

Methylation profiles of genes utilizing newly developed CpG island methylation microarray on colorectal cancer patients
por: Kimura, Naoki, et al.
Publicado: (2005)

Methylation detection oligonucleotide microarray analysis: a high-resolution method for detection of CpG island methylation
por: Kamalakaran, Sitharthan, et al.
Publicado: (2009)

DNA methylation determines nucleosome occupancy in the 5′-CpG islands of tumor suppressor genes
por: Portela, A, et al.
Publicado: (2013)

The Control Region of Mitochondrial DNA Shows an Unusual CpG and Non-CpG Methylation Pattern
por: Bellizzi, Dina, et al.
Publicado: (2013)

Low biological fluctuation of mitochondrial CpG and non-CpG methylation at the single-molecule level
por: Goldsmith, Chloe, et al.
Publicado: (2021)

DNA methylation in human epigenomes depends on local topology of CpG sites
por: Lövkvist, Cecilia, et al.
Publicado: (2016)

Genome-wide identification of methylated CpG sites in nongenital cutaneous warts
por: AL-Eitan, Laith N., et al.
Publicado: (2020)

Identification of Differentially Methylated CpG Sites in Fibroblasts from Keloid Scars
por: Alghamdi, Mansour A., et al.
Publicado: (2020)

Identifying fenofibrate responsive CpG sites
por: Cantor, Rita, et al.
Publicado: (2018)

Polymorphisms involving gain or loss of CpG sites are significantly enriched in trait-associated SNPs
por: Zhou, Dan, et al.
Publicado: (2015)

In silico identification of single nucleotide variations at CpG sites regulating CpG island existence and size
por: Shyamala, Nivas, et al.
Publicado: (2022)

CpG Island microarray probe sequences derived from a physical library are representative of CpG Islands annotated on the human genome
por: Heisler, Lawrence E., et al.
Publicado: (2005)

Site-specific CpG methylation in the CCAAT/enhancer binding protein delta (CEBPδ) CpG island in breast cancer is associated with metastatic relapse
por: Palmieri, C, et al.
Publicado: (2012)

Analysis of CpG methylation sites and CGI among human papillomavirus DNA genomes
por: Galván, Silvia C, et al.
Publicado: (2011)

A subset of methylated CpG sites differentiate psoriatic from normal skin
por: Roberson, Elisha D.O., et al.
Publicado: (2011)

Aberrant Methylation of Gene Associated CpG Sites Occurs in Borderline Personality Disorder
por: Teschler, Stefanie, et al.
Publicado: (2013)

Evolutionary conservation of DNA methylation in CpG sites within ultraconserved noncoding elements
por: Colwell, Mathia, et al.
Publicado: (2018)

Differentially methylated CpG sites associated with the high-risk group of prostate cancer
por: Kobelyatskaya, Anastasiya, et al.
Publicado: (2020)

HPA axis dysregulation is associated with differential methylation of CpG-sites in related genes
por: Chatzittofis, Andreas, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_a4g242pvuj6pkbe5q364h8ih4b