Cargando…

Benchmarking Inverse Statistical Approaches for Protein Structure and Design with Exactly Solvable Models

Inverse statistical approaches to determine protein structure and function from Multiple Sequence Alignments (MSA) are emerging as powerful tools in computational biology. However the underlying assumptions of the relationship between the inferred effective Potts Hamiltonian and real protein structu...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jacquin, Hugo, Gilson, Amy, Shakhnovich, Eugene, Cocco, Simona, Monasson, Rémi
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Public Library of Science 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4866778/ https://www.ncbi.nlm.nih.gov/pubmed/27177270 http://dx.doi.org/10.1371/journal.pcbi.1004889

Ejemplares similares

Exactly solvable statistical physics models for large neuronal populations
por: Lynn, Christopher W., et al.
Publicado: (2023)

Entropy Production in Exactly Solvable Systems
por: Cocconi, Luca, et al.
Publicado: (2020)

Exactly solvable models in many-body theory
por: March, N H, et al.
Publicado: (2016)

Quasi-exactly solvable models in quantum mechanics
por: Ushveridze, A G
Publicado: (1994)

Exactly solvable models of strongly correlated electrons
por: Essler, Fabian H L, et al.
Publicado: (1994)

Off-diagonal Bethe ansatz for exactly solvable models
por: Wang, Yupeng, et al.
Publicado: (2015)

Exactly solvable models of evolution processes in random environments
por: Dzheparov, F S, et al.
Publicado: (2001)

Exactly solvable models for investigation of dynamical quantum systems
por: Suzko, A A, et al.
Publicado: (1997)

An exactly solvable, spatial model of mutation accumulation in cancer
por: Paterson, Chay, et al.
Publicado: (2016)

Exactly solvable string models of curved space-time backgrounds
por: Russo, J.G., et al.
Publicado: (1995)

Strength of the double-phonon state within an exactly solvable model
por: Dang, N D
Publicado: (2001)

Continual Lie algebras and noncommutative counterparts of exactly solvable models
por: Zuevsky, A B
Publicado: (2003)

Exactly solvable nonlinear partial differential equations of the third order
por: Akhundova, E A, et al.
Publicado: (1978)

Erratum: An exactly solvable, spatial model of mutation accumulation in cancer
por: Paterson, Chay, et al.
Publicado: (2017)

Introduction to exactly solvable models, conformal field theory and quantum groups
por: Gómez, César
Publicado: (1990)

Quantum description of heat baths and thermal equilibria in an exactly solvable model
por: Kobayashi, T
Publicado: (1995)

Constant magnetic field in closed string theory: an exactly solvable model
por: Russo, J.G., et al.
Publicado: (1994)

Winter School and International Colloquium on Exactly-solvable Problems in Condensed Matter
por: Jha, S S, et al.
Publicado: (1985)

Exactly solvable SIR models, their extensions and their application to sensitive pandemic forecasting
por: Sadurní, E., et al.
Publicado: (2021)

High energy asymptotics of multi-colour QCD and exactly solvable lattice models
por: Lipatov, L N
Publicado: (1993)

Exactly solvable spin chain models corresponding to BDI class of topological superconductors
por: Jafari, S. A., et al.
Publicado: (2016)

Nonlocal Kondo effect and two-fluid picture revealed in an exactly solvable model
por: Wang, Jiangfan, et al.
Publicado: (2023)

Adaptive cluster algorithm to infer Boltzmann machines from multi-electrode recording data
por: Cocco, Simona, et al.
Publicado: (2011)

From Principal Component to Direct Coupling Analysis of Coevolution in Proteins: Low-Eigenvalue Modes are Needed for Structure Prediction
por: Cocco, Simona, et al.
Publicado: (2013)

Multidimensional exactly solvable problems in quantum mechanics and pullbacks of affine co-ordinates on the Grassmannian
por: Losev, A S, et al.
Publicado: (1992)

SO(2,1) Lie algebra and the Green's functions for the conditionally exactly solvable potentials
por: De Souza-Dutra, A, et al.
Publicado: (1994)

A study of exactly solvable lattice gauge theories in two space-time dimensions
por: Lang, C B, et al.
Publicado: (1981)

Corrigendum: Exactly solvable spin chain models corresponding to BDI class of topological superconductors
por: Jafari, S. A., et al.
Publicado: (2016)

Exactly solvable model for a velocity jump observed in crack propagation in viscoelastic solids
por: Sakumichi, Naoyuki, et al.
Publicado: (2017)

Information-Theoretic Features of Many Fermion Systems: An Exploration Based on Exactly Solvable Models
por: Plastino, Angel Ricardo, et al.
Publicado: (2021)

Superradiant Quantum Phase Transition for an Exactly Solvable Two-Qubit Spin-Boson Model
por: Grimaudo, Roberto, et al.
Publicado: (2023)

Inferring interactions in assemblies of stochastic integrate-and-fire neurons from spike recordings: method, applications and software
por: Barbieri, Carlo, et al.
Publicado: (2011)

Integration and multiplexing of positional and contextual information by the hippocampal network
por: Posani, Lorenzo, et al.
Publicado: (2018)

Learning protein constitutive motifs from sequence data
por: Tubiana, Jérôme, et al.
Publicado: (2019)

Improving sequence-based modeling of protein families using secondary-structure quality assessment
por: Malbranke, Cyril, et al.
Publicado: (2021)

Exactly solvable quantum macroscopic motions and decoherence mechanism based on many quantum-mechanical space theory
por: Kobayashi, T
Publicado: (1994)

Adaptation of olfactory receptor abundances for efficient coding
por: Teşileanu, Tiberiu, et al.
Publicado: (2019)

Infer global, predict local: Quantity-relevance trade-off in protein fitness predictions from sequence data
por: Posani, Lorenzo, et al.
Publicado: (2023)

The solvability conditions for the inverse eigenvalue problem of normal skew J-Hamiltonian matrices
por: Zhao, Jia, et al.
Publicado: (2018)

Exactly solvable model of two trapped quantum particles interacting via finite-range soft-core interactions
por: Kościk, Przemysław, et al.
Publicado: (2018)

Cannot write session to /tmp/vufind_sessions/sess_2oa88kvn216bv0c6nl8uki7ir0