Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling

BACKGROUND: High-throughput sequencing enables unbiased profiling of microbial communities, universal pathogen detection, and host response to infectious diseases. However, computation times and algorithmic inaccuracies have hindered adoption. RESULTS: We present Taxonomer, an ultrafast, web-tool fo...

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Detalles Bibliográficos
Autores principales: Flygare, Steven, Simmon, Keith, Miller, Chase, Qiao, Yi, Kennedy, Brett, Di Sera, Tonya, Graf, Erin H., Tardif, Keith D., Kapusta, Aurélie, Rynearson, Shawn, Stockmann, Chris, Queen, Krista, Tong, Suxiang, Voelkerding, Karl V., Blaschke, Anne, Byington, Carrie L., Jain, Seema, Pavia, Andrew, Ampofo, Krow, Eilbeck, Karen, Marth, Gabor, Yandell, Mark, Schlaberg, Robert
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4880956/
https://www.ncbi.nlm.nih.gov/pubmed/27224977
http://dx.doi.org/10.1186/s13059-016-0969-1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4880956/
https://www.ncbi.nlm.nih.gov/pubmed/27224977
http://dx.doi.org/10.1186/s13059-016-0969-1

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