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Efficient molecular dynamics using geodesic integration and solvent–solute splitting

We present an approach to Langevin dynamics in the presence of holonomic constraints based on decomposition of the system into components representing geodesic flow, constrained impulse and constrained diffusion. We show that a particular ordering of the components results in an integrator that is a...

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Detalles Bibliográficos
Autores principales: Leimkuhler, Benedict, Matthews, Charles
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society Publishing 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4893190/
https://www.ncbi.nlm.nih.gov/pubmed/27279779
http://dx.doi.org/10.1098/rspa.2016.0138