deBWT: parallel construction of Burrows–Wheeler Transform for large collection of genomes with de Bruijn-branch encoding

Motivation: With the development of high-throughput sequencing, the number of assembled genomes continues to rise. It is critical to well organize and index many assembled genomes to promote future genomics studies. Burrows–Wheeler Transform (BWT) is an important data structure of genome indexing, w...

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Detalles Bibliográficos
Autores principales: Liu, Bo, Zhu, Dixian, Wang, Yadong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Ismb 2016 Proceedings July 8 to July 12, 2016, Orlando, Florida
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908350/
https://www.ncbi.nlm.nih.gov/pubmed/27307614
http://dx.doi.org/10.1093/bioinformatics/btw266

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4908350/
https://www.ncbi.nlm.nih.gov/pubmed/27307614
http://dx.doi.org/10.1093/bioinformatics/btw266

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