Mash: fast genome and metagenome distance estimation using MinHash

Mash extends the MinHash dimensionality-reduction technique to include a pairwise mutation distance and P value significance test, enabling the efficient clustering and search of massive sequence collections. Mash reduces large sequences and sequence sets to small, representative sketches, from whic...

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Detalles Bibliográficos
Autores principales: Ondov, Brian D., Treangen, Todd J., Melsted, Páll, Mallonee, Adam B., Bergman, Nicholas H., Koren, Sergey, Phillippy, Adam M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915045/
https://www.ncbi.nlm.nih.gov/pubmed/27323842
http://dx.doi.org/10.1186/s13059-016-0997-x

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915045/
https://www.ncbi.nlm.nih.gov/pubmed/27323842
http://dx.doi.org/10.1186/s13059-016-0997-x

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