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Consensus protein design

A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average...

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Detalles Bibliográficos
Autores principales: Porebski, Benjamin T., Buckle, Ashley M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917058/
https://www.ncbi.nlm.nih.gov/pubmed/27274091
http://dx.doi.org/10.1093/protein/gzw015
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author Porebski, Benjamin T.
Buckle, Ashley M.
author_facet Porebski, Benjamin T.
Buckle, Ashley M.
author_sort Porebski, Benjamin T.
collection PubMed
description A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average to the stability of the protein than non-conserved amino acids. Here, we review the consensus design approach, its theoretical underpinnings, successes, limitations and challenges, as well as providing a detailed guide to its application in protein engineering.
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spelling pubmed-49170582016-06-23 Consensus protein design Porebski, Benjamin T. Buckle, Ashley M. Protein Eng Des Sel Review A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average to the stability of the protein than non-conserved amino acids. Here, we review the consensus design approach, its theoretical underpinnings, successes, limitations and challenges, as well as providing a detailed guide to its application in protein engineering. Oxford University Press 2016-07 2016-06-05 /pmc/articles/PMC4917058/ /pubmed/27274091 http://dx.doi.org/10.1093/protein/gzw015 Text en © The Author 2016. Published by Oxford University Press http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Review
Porebski, Benjamin T.
Buckle, Ashley M.
Consensus protein design
title Consensus protein design
title_full Consensus protein design
title_fullStr Consensus protein design
title_full_unstemmed Consensus protein design
title_short Consensus protein design
title_sort consensus protein design
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917058/
https://www.ncbi.nlm.nih.gov/pubmed/27274091
http://dx.doi.org/10.1093/protein/gzw015
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