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Consensus protein design
A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917058/ https://www.ncbi.nlm.nih.gov/pubmed/27274091 http://dx.doi.org/10.1093/protein/gzw015 |
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author | Porebski, Benjamin T. Buckle, Ashley M. |
author_facet | Porebski, Benjamin T. Buckle, Ashley M. |
author_sort | Porebski, Benjamin T. |
collection | PubMed |
description | A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average to the stability of the protein than non-conserved amino acids. Here, we review the consensus design approach, its theoretical underpinnings, successes, limitations and challenges, as well as providing a detailed guide to its application in protein engineering. |
format | Online Article Text |
id | pubmed-4917058 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-49170582016-06-23 Consensus protein design Porebski, Benjamin T. Buckle, Ashley M. Protein Eng Des Sel Review A popular and successful strategy in semi-rational design of protein stability is the use of evolutionary information encapsulated in homologous protein sequences. Consensus design is based on the hypothesis that at a given position, the respective consensus amino acid contributes more than average to the stability of the protein than non-conserved amino acids. Here, we review the consensus design approach, its theoretical underpinnings, successes, limitations and challenges, as well as providing a detailed guide to its application in protein engineering. Oxford University Press 2016-07 2016-06-05 /pmc/articles/PMC4917058/ /pubmed/27274091 http://dx.doi.org/10.1093/protein/gzw015 Text en © The Author 2016. Published by Oxford University Press http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Review Porebski, Benjamin T. Buckle, Ashley M. Consensus protein design |
title | Consensus protein design |
title_full | Consensus protein design |
title_fullStr | Consensus protein design |
title_full_unstemmed | Consensus protein design |
title_short | Consensus protein design |
title_sort | consensus protein design |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4917058/ https://www.ncbi.nlm.nih.gov/pubmed/27274091 http://dx.doi.org/10.1093/protein/gzw015 |
work_keys_str_mv | AT porebskibenjamint consensusproteindesign AT buckleashleym consensusproteindesign |