Cargando…

TagDigger: user-friendly extraction of read counts from GBS and RAD-seq data

BACKGROUND: In genotyping-by-sequencing (GBS) and restriction site-associated DNA sequencing (RAD-seq), read depth is important for assessing the quality of genotype calls and estimating allele dosage in polyploids. However, existing pipelines for GBS and RAD-seq do not provide read counts in format...

Descripción completa

Detalles Bibliográficos
Autores principales: Clark, Lindsay V., Sacks, Erik J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4940913/
https://www.ncbi.nlm.nih.gov/pubmed/27408618
http://dx.doi.org/10.1186/s13029-016-0057-7