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An improved Four-Russians method and sparsified Four-Russians algorithm for RNA folding

BACKGROUND: The basic RNA secondary structure prediction problem or single sequence folding problem (SSF) was solved 35 years ago by a now well-known [Formula: see text] -time dynamic programming method. Recently three methodologies—Valiant, Four-Russians, and Sparsification—have been applied to spe...

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Detalles Bibliográficos
Autores principales: Frid, Yelena, Gusfield, Dan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4974819/
https://www.ncbi.nlm.nih.gov/pubmed/27499801
http://dx.doi.org/10.1186/s13015-016-0081-9