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PIPITS: an automated pipeline for analyses of fungal internal transcribed spacer sequences from the Illumina sequencing platform

1. Studying fungal biodiversity using data generated from Illumina MiSeq sequencing platforms poses a number of bioinformatic challenges with the analysis typically involving a large number of tools for each analytical step from quality filtering to generating identified operational taxonomic unit (...

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Detalles Bibliográficos
Autores principales: Gweon, Hyun S., Oliver, Anna, Taylor, Joanne, Booth, Tim, Gibbs, Melanie, Read, Daniel S., Griffiths, Robert I., Schonrogge, Karsten
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4981123/
https://www.ncbi.nlm.nih.gov/pubmed/27570615
http://dx.doi.org/10.1111/2041-210X.12399