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Translesion Synthesis of the N(2)-2′-Deoxyguanosine Adduct of the Dietary Mutagen IQ in Human Cells: Error-Free Replication by DNA Polymerase κ and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1
[Image: see text] Translesion synthesis (TLS) of the N(2)-2′-deoxyguanosine (dG-N(2)-IQ) adduct of the carcinogen 2-amino-3-methylimidazo[4,5-f]quinoline (IQ) was investigated in human embryonic kidney 293T cells by replicating plasmid constructs in which the adduct was individually placed at each g...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2016
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031085/ https://www.ncbi.nlm.nih.gov/pubmed/27490094 http://dx.doi.org/10.1021/acs.chemrestox.6b00221 |
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author | Bose, Arindam Millsap, Amy D. DeLeon, Arnie Rizzo, Carmelo J. Basu, Ashis K. |
author_facet | Bose, Arindam Millsap, Amy D. DeLeon, Arnie Rizzo, Carmelo J. Basu, Ashis K. |
author_sort | Bose, Arindam |
collection | PubMed |
description | [Image: see text] Translesion synthesis (TLS) of the N(2)-2′-deoxyguanosine (dG-N(2)-IQ) adduct of the carcinogen 2-amino-3-methylimidazo[4,5-f]quinoline (IQ) was investigated in human embryonic kidney 293T cells by replicating plasmid constructs in which the adduct was individually placed at each guanine (G(1), G(2), or G(3)) of the NarI sequence (5′-CG(1)G(2)CG(3)CC-3′). TLS efficiency was 38%, 29%, and 25% for the dG-N(2)-IQ located at G(1), G(2), and G(3), respectively, which suggests that dG-N(2)-IQ is bypassed more efficiently by one or more DNA polymerases at G(1) than at either G(2) or G(3). TLS efficiency was decreased 8–35% in cells with knockdown of pol η, pol κ, pol ι, pol ζ, or Rev1. Up to 75% reduction in TLS occurred when pol η, pol ζ, and Rev1 were simultaneously knocked down, suggesting that these three polymerases play important roles in dG-N(2)-IQ bypass. Mutation frequencies (MFs) of dG-N(2)-IQ at G(1), G(2), and G(3) were 23%, 17%, and 11%, respectively, exhibiting a completely reverse trend of the previously reported MF of the C8-dG adduct of IQ (dG-C8-IQ), which is most mutagenic at G(3) ((2015) Nucleic Acids Res.43, 8340−835126220181). The major type of mutation induced by dG-N(2)-IQ was targeted G → T, as was reported for dG-C8-IQ. In each site, knockdown of pol κ resulted in an increase in MF, whereas MF was reduced when pol η, pol ι, pol ζ, or Rev1 was knocked down. The reduction in MF was most pronounced when pol η, pol ζ, and Rev1 were simultaneously knocked down and especially when the adduct was located at G(3), where MF was reduced by 90%. We conclude that pol κ predominantly performs error-free TLS of the dG-N(2)-IQ adduct, whereas pols η, pol ζ, and Rev1 cooperatively carry out the error-prone TLS. However, in vitro experiments using yeast pol ζ and κ showed that the former was inefficient in full-length primer extension on dG-N(2)-IQ templates, whereas the latter was efficient in both error-free and error-prone extensions. We believe that the observed differences between the in vitro experiments using purified DNA polymerases, and the cellular results may arise from several factors including the crucial roles played by the accessory proteins in TLS. |
format | Online Article Text |
id | pubmed-5031085 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-50310852017-08-04 Translesion Synthesis of the N(2)-2′-Deoxyguanosine Adduct of the Dietary Mutagen IQ in Human Cells: Error-Free Replication by DNA Polymerase κ and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 Bose, Arindam Millsap, Amy D. DeLeon, Arnie Rizzo, Carmelo J. Basu, Ashis K. Chem Res Toxicol [Image: see text] Translesion synthesis (TLS) of the N(2)-2′-deoxyguanosine (dG-N(2)-IQ) adduct of the carcinogen 2-amino-3-methylimidazo[4,5-f]quinoline (IQ) was investigated in human embryonic kidney 293T cells by replicating plasmid constructs in which the adduct was individually placed at each guanine (G(1), G(2), or G(3)) of the NarI sequence (5′-CG(1)G(2)CG(3)CC-3′). TLS efficiency was 38%, 29%, and 25% for the dG-N(2)-IQ located at G(1), G(2), and G(3), respectively, which suggests that dG-N(2)-IQ is bypassed more efficiently by one or more DNA polymerases at G(1) than at either G(2) or G(3). TLS efficiency was decreased 8–35% in cells with knockdown of pol η, pol κ, pol ι, pol ζ, or Rev1. Up to 75% reduction in TLS occurred when pol η, pol ζ, and Rev1 were simultaneously knocked down, suggesting that these three polymerases play important roles in dG-N(2)-IQ bypass. Mutation frequencies (MFs) of dG-N(2)-IQ at G(1), G(2), and G(3) were 23%, 17%, and 11%, respectively, exhibiting a completely reverse trend of the previously reported MF of the C8-dG adduct of IQ (dG-C8-IQ), which is most mutagenic at G(3) ((2015) Nucleic Acids Res.43, 8340−835126220181). The major type of mutation induced by dG-N(2)-IQ was targeted G → T, as was reported for dG-C8-IQ. In each site, knockdown of pol κ resulted in an increase in MF, whereas MF was reduced when pol η, pol ι, pol ζ, or Rev1 was knocked down. The reduction in MF was most pronounced when pol η, pol ζ, and Rev1 were simultaneously knocked down and especially when the adduct was located at G(3), where MF was reduced by 90%. We conclude that pol κ predominantly performs error-free TLS of the dG-N(2)-IQ adduct, whereas pols η, pol ζ, and Rev1 cooperatively carry out the error-prone TLS. However, in vitro experiments using yeast pol ζ and κ showed that the former was inefficient in full-length primer extension on dG-N(2)-IQ templates, whereas the latter was efficient in both error-free and error-prone extensions. We believe that the observed differences between the in vitro experiments using purified DNA polymerases, and the cellular results may arise from several factors including the crucial roles played by the accessory proteins in TLS. American Chemical Society 2016-08-04 2016-09-19 /pmc/articles/PMC5031085/ /pubmed/27490094 http://dx.doi.org/10.1021/acs.chemrestox.6b00221 Text en Copyright © 2016 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Bose, Arindam Millsap, Amy D. DeLeon, Arnie Rizzo, Carmelo J. Basu, Ashis K. Translesion Synthesis of the N(2)-2′-Deoxyguanosine Adduct of the Dietary Mutagen IQ in Human Cells: Error-Free Replication by DNA Polymerase κ and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 |
title | Translesion Synthesis
of the N(2)-2′-Deoxyguanosine
Adduct of the Dietary Mutagen
IQ in Human Cells: Error-Free Replication by DNA Polymerase κ
and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 |
title_full | Translesion Synthesis
of the N(2)-2′-Deoxyguanosine
Adduct of the Dietary Mutagen
IQ in Human Cells: Error-Free Replication by DNA Polymerase κ
and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 |
title_fullStr | Translesion Synthesis
of the N(2)-2′-Deoxyguanosine
Adduct of the Dietary Mutagen
IQ in Human Cells: Error-Free Replication by DNA Polymerase κ
and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 |
title_full_unstemmed | Translesion Synthesis
of the N(2)-2′-Deoxyguanosine
Adduct of the Dietary Mutagen
IQ in Human Cells: Error-Free Replication by DNA Polymerase κ
and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 |
title_short | Translesion Synthesis
of the N(2)-2′-Deoxyguanosine
Adduct of the Dietary Mutagen
IQ in Human Cells: Error-Free Replication by DNA Polymerase κ
and Mutagenic Bypass by DNA Polymerases η, ζ, and Rev1 |
title_sort | translesion synthesis
of the n(2)-2′-deoxyguanosine
adduct of the dietary mutagen
iq in human cells: error-free replication by dna polymerase κ
and mutagenic bypass by dna polymerases η, ζ, and rev1 |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5031085/ https://www.ncbi.nlm.nih.gov/pubmed/27490094 http://dx.doi.org/10.1021/acs.chemrestox.6b00221 |
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