Cargando…

Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin

The seven-helical bundle of rhodopsin and other G-protein coupled receptors undergoes structural rearrangements as the transmembrane receptor protein is activated. These structural changes are known to involve tilting and bending of various transmembrane helices. However, the cause and effect relati...

Descripción completa

Detalles Bibliográficos
Autores principales: Ren, Zhong, Ren, Peter X., Balusu, Rohith, Yang, Xiaojing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5034245/
https://www.ncbi.nlm.nih.gov/pubmed/27658480
http://dx.doi.org/10.1038/srep34129
_version_ 1782455232776634368
author Ren, Zhong
Ren, Peter X.
Balusu, Rohith
Yang, Xiaojing
author_facet Ren, Zhong
Ren, Peter X.
Balusu, Rohith
Yang, Xiaojing
author_sort Ren, Zhong
collection PubMed
description The seven-helical bundle of rhodopsin and other G-protein coupled receptors undergoes structural rearrangements as the transmembrane receptor protein is activated. These structural changes are known to involve tilting and bending of various transmembrane helices. However, the cause and effect relationship among structural events leading to a cytoplasmic crevasse for G-protein binding is less well defined. Here we present a mathematical model of the protein helix and a simple procedure to determine multiple parameters that offer precise depiction of a helical conformation. A comprehensive survey of bovine rhodopsin structures shows that the helical rearrangements during the activation of rhodopsin involve a variety of angular and linear motions such as torsion, unwinding, and sliding in addition to the previously reported tilting and bending. These hitherto undefined motion components unify the results obtained from different experimental approaches, and demonstrate conformational similarity between the active opsin structure and the photoactivated structures in crystallo near the retinal anchor despite their marked differences.
format Online
Article
Text
id pubmed-5034245
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-50342452016-09-29 Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin Ren, Zhong Ren, Peter X. Balusu, Rohith Yang, Xiaojing Sci Rep Article The seven-helical bundle of rhodopsin and other G-protein coupled receptors undergoes structural rearrangements as the transmembrane receptor protein is activated. These structural changes are known to involve tilting and bending of various transmembrane helices. However, the cause and effect relationship among structural events leading to a cytoplasmic crevasse for G-protein binding is less well defined. Here we present a mathematical model of the protein helix and a simple procedure to determine multiple parameters that offer precise depiction of a helical conformation. A comprehensive survey of bovine rhodopsin structures shows that the helical rearrangements during the activation of rhodopsin involve a variety of angular and linear motions such as torsion, unwinding, and sliding in addition to the previously reported tilting and bending. These hitherto undefined motion components unify the results obtained from different experimental approaches, and demonstrate conformational similarity between the active opsin structure and the photoactivated structures in crystallo near the retinal anchor despite their marked differences. Nature Publishing Group 2016-09-23 /pmc/articles/PMC5034245/ /pubmed/27658480 http://dx.doi.org/10.1038/srep34129 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Ren, Zhong
Ren, Peter X.
Balusu, Rohith
Yang, Xiaojing
Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
title Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
title_full Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
title_fullStr Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
title_full_unstemmed Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
title_short Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
title_sort transmembrane helices tilt, bend, slide, torque, and unwind between functional states of rhodopsin
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5034245/
https://www.ncbi.nlm.nih.gov/pubmed/27658480
http://dx.doi.org/10.1038/srep34129
work_keys_str_mv AT renzhong transmembranehelicestiltbendslidetorqueandunwindbetweenfunctionalstatesofrhodopsin
AT renpeterx transmembranehelicestiltbendslidetorqueandunwindbetweenfunctionalstatesofrhodopsin
AT balusurohith transmembranehelicestiltbendslidetorqueandunwindbetweenfunctionalstatesofrhodopsin
AT yangxiaojing transmembranehelicestiltbendslidetorqueandunwindbetweenfunctionalstatesofrhodopsin