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Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin
The seven-helical bundle of rhodopsin and other G-protein coupled receptors undergoes structural rearrangements as the transmembrane receptor protein is activated. These structural changes are known to involve tilting and bending of various transmembrane helices. However, the cause and effect relati...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5034245/ https://www.ncbi.nlm.nih.gov/pubmed/27658480 http://dx.doi.org/10.1038/srep34129 |
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author | Ren, Zhong Ren, Peter X. Balusu, Rohith Yang, Xiaojing |
author_facet | Ren, Zhong Ren, Peter X. Balusu, Rohith Yang, Xiaojing |
author_sort | Ren, Zhong |
collection | PubMed |
description | The seven-helical bundle of rhodopsin and other G-protein coupled receptors undergoes structural rearrangements as the transmembrane receptor protein is activated. These structural changes are known to involve tilting and bending of various transmembrane helices. However, the cause and effect relationship among structural events leading to a cytoplasmic crevasse for G-protein binding is less well defined. Here we present a mathematical model of the protein helix and a simple procedure to determine multiple parameters that offer precise depiction of a helical conformation. A comprehensive survey of bovine rhodopsin structures shows that the helical rearrangements during the activation of rhodopsin involve a variety of angular and linear motions such as torsion, unwinding, and sliding in addition to the previously reported tilting and bending. These hitherto undefined motion components unify the results obtained from different experimental approaches, and demonstrate conformational similarity between the active opsin structure and the photoactivated structures in crystallo near the retinal anchor despite their marked differences. |
format | Online Article Text |
id | pubmed-5034245 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-50342452016-09-29 Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin Ren, Zhong Ren, Peter X. Balusu, Rohith Yang, Xiaojing Sci Rep Article The seven-helical bundle of rhodopsin and other G-protein coupled receptors undergoes structural rearrangements as the transmembrane receptor protein is activated. These structural changes are known to involve tilting and bending of various transmembrane helices. However, the cause and effect relationship among structural events leading to a cytoplasmic crevasse for G-protein binding is less well defined. Here we present a mathematical model of the protein helix and a simple procedure to determine multiple parameters that offer precise depiction of a helical conformation. A comprehensive survey of bovine rhodopsin structures shows that the helical rearrangements during the activation of rhodopsin involve a variety of angular and linear motions such as torsion, unwinding, and sliding in addition to the previously reported tilting and bending. These hitherto undefined motion components unify the results obtained from different experimental approaches, and demonstrate conformational similarity between the active opsin structure and the photoactivated structures in crystallo near the retinal anchor despite their marked differences. Nature Publishing Group 2016-09-23 /pmc/articles/PMC5034245/ /pubmed/27658480 http://dx.doi.org/10.1038/srep34129 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Ren, Zhong Ren, Peter X. Balusu, Rohith Yang, Xiaojing Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin |
title | Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin |
title_full | Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin |
title_fullStr | Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin |
title_full_unstemmed | Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin |
title_short | Transmembrane Helices Tilt, Bend, Slide, Torque, and Unwind between Functional States of Rhodopsin |
title_sort | transmembrane helices tilt, bend, slide, torque, and unwind between functional states of rhodopsin |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5034245/ https://www.ncbi.nlm.nih.gov/pubmed/27658480 http://dx.doi.org/10.1038/srep34129 |
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