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Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation
Recent studies suggest that cells make stochastic choices with respect to differentiation or division. However, the molecular mechanism underlying such stochasticity is unknown. We previously proposed that the timing of vertebrate neuronal differentiation is regulated by molecular oscillations of a...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
eLife Sciences Publications, Ltd
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5050025/ https://www.ncbi.nlm.nih.gov/pubmed/27700985 http://dx.doi.org/10.7554/eLife.16118 |
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author | Phillips, Nick E Manning, Cerys S Pettini, Tom Biga, Veronica Marinopoulou, Elli Stanley, Peter Boyd, James Bagnall, James Paszek, Pawel Spiller, David G White, Michael RH Goodfellow, Marc Galla, Tobias Rattray, Magnus Papalopulu, Nancy |
author_facet | Phillips, Nick E Manning, Cerys S Pettini, Tom Biga, Veronica Marinopoulou, Elli Stanley, Peter Boyd, James Bagnall, James Paszek, Pawel Spiller, David G White, Michael RH Goodfellow, Marc Galla, Tobias Rattray, Magnus Papalopulu, Nancy |
author_sort | Phillips, Nick E |
collection | PubMed |
description | Recent studies suggest that cells make stochastic choices with respect to differentiation or division. However, the molecular mechanism underlying such stochasticity is unknown. We previously proposed that the timing of vertebrate neuronal differentiation is regulated by molecular oscillations of a transcriptional repressor, HES1, tuned by a post-transcriptional repressor, miR-9. Here, we computationally model the effects of intrinsic noise on the Hes1/miR-9 oscillator as a consequence of low molecular numbers of interacting species, determined experimentally. We report that increased stochasticity spreads the timing of differentiation in a population, such that initially equivalent cells differentiate over a period of time. Surprisingly, inherent stochasticity also increases the robustness of the progenitor state and lessens the impact of unequal, random distribution of molecules at cell division on the temporal spread of differentiation at the population level. This advantageous use of biological noise contrasts with the view that noise needs to be counteracted. DOI: http://dx.doi.org/10.7554/eLife.16118.001 |
format | Online Article Text |
id | pubmed-5050025 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | eLife Sciences Publications, Ltd |
record_format | MEDLINE/PubMed |
spelling | pubmed-50500252016-10-06 Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation Phillips, Nick E Manning, Cerys S Pettini, Tom Biga, Veronica Marinopoulou, Elli Stanley, Peter Boyd, James Bagnall, James Paszek, Pawel Spiller, David G White, Michael RH Goodfellow, Marc Galla, Tobias Rattray, Magnus Papalopulu, Nancy eLife Computational and Systems Biology Recent studies suggest that cells make stochastic choices with respect to differentiation or division. However, the molecular mechanism underlying such stochasticity is unknown. We previously proposed that the timing of vertebrate neuronal differentiation is regulated by molecular oscillations of a transcriptional repressor, HES1, tuned by a post-transcriptional repressor, miR-9. Here, we computationally model the effects of intrinsic noise on the Hes1/miR-9 oscillator as a consequence of low molecular numbers of interacting species, determined experimentally. We report that increased stochasticity spreads the timing of differentiation in a population, such that initially equivalent cells differentiate over a period of time. Surprisingly, inherent stochasticity also increases the robustness of the progenitor state and lessens the impact of unequal, random distribution of molecules at cell division on the temporal spread of differentiation at the population level. This advantageous use of biological noise contrasts with the view that noise needs to be counteracted. DOI: http://dx.doi.org/10.7554/eLife.16118.001 eLife Sciences Publications, Ltd 2016-10-04 /pmc/articles/PMC5050025/ /pubmed/27700985 http://dx.doi.org/10.7554/eLife.16118 Text en © 2016, Phillips et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited. |
spellingShingle | Computational and Systems Biology Phillips, Nick E Manning, Cerys S Pettini, Tom Biga, Veronica Marinopoulou, Elli Stanley, Peter Boyd, James Bagnall, James Paszek, Pawel Spiller, David G White, Michael RH Goodfellow, Marc Galla, Tobias Rattray, Magnus Papalopulu, Nancy Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
title | Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
title_full | Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
title_fullStr | Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
title_full_unstemmed | Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
title_short | Stochasticity in the miR-9/Hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
title_sort | stochasticity in the mir-9/hes1 oscillatory network can account for clonal heterogeneity in the timing of differentiation |
topic | Computational and Systems Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5050025/ https://www.ncbi.nlm.nih.gov/pubmed/27700985 http://dx.doi.org/10.7554/eLife.16118 |
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