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Comparative survey of the relative impact of mRNA features on local ribosome profiling read density

Ribosome profiling (Ribo-seq), a promising technology for exploring ribosome decoding rates, is characterized by the presence of infrequent high peaks in ribosome footprint density and by long alignment gaps. Here, to reduce the impact of data heterogeneity we introduce a simple normalization method...

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Detalles Bibliográficos
Autores principales: O'Connor, Patrick B. F., Andreev, Dmitry E., Baranov, Pavel V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5059445/
https://www.ncbi.nlm.nih.gov/pubmed/27698342
http://dx.doi.org/10.1038/ncomms12915