rasbhari: Optimizing Spaced Seeds for Database Searching, Read Mapping and Alignment-Free Sequence Comparison

Many algorithms for sequence analysis rely on word matching or word statistics. Often, these approaches can be improved if binary patterns representing match and don’t-care positions are used as a filter, such that only those positions of words are considered that correspond to the match positions o...

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Detalles Bibliográficos
Autores principales: Hahn, Lars, Leimeister, Chris-André, Ounit, Rachid, Lonardi, Stefano, Morgenstern, Burkhard
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070788/
https://www.ncbi.nlm.nih.gov/pubmed/27760124
http://dx.doi.org/10.1371/journal.pcbi.1005107

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5070788/
https://www.ncbi.nlm.nih.gov/pubmed/27760124
http://dx.doi.org/10.1371/journal.pcbi.1005107

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