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Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues

It is commonly assumed that drug targets are expressed in tissues relevant to their indicated diseases, even under normal conditions. While multiple anecdotal cases support this hypothesis, a comprehensive study has not been performed to verify it. We conducted a systematic analysis to assess gene a...

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Detalles Bibliográficos
Autores principales: Kumar, Vinod, Sanseau, Philippe, Simola, Daniel F., Hurle, Mark R., Agarwal, Pankaj
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5099936/
https://www.ncbi.nlm.nih.gov/pubmed/27824084
http://dx.doi.org/10.1038/srep36205
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author Kumar, Vinod
Sanseau, Philippe
Simola, Daniel F.
Hurle, Mark R.
Agarwal, Pankaj
author_facet Kumar, Vinod
Sanseau, Philippe
Simola, Daniel F.
Hurle, Mark R.
Agarwal, Pankaj
author_sort Kumar, Vinod
collection PubMed
description It is commonly assumed that drug targets are expressed in tissues relevant to their indicated diseases, even under normal conditions. While multiple anecdotal cases support this hypothesis, a comprehensive study has not been performed to verify it. We conducted a systematic analysis to assess gene and protein expression for all targets of marketed and phase III drugs across a diverse collection of normal human tissues. For 87% of gene-disease pairs, the target is expressed in a disease-affected tissue under healthy conditions. This result validates the importance of confirming expression of a novel drug target in an appropriate tissue for each disease indication and strengthens previous findings showing that targets of efficacious drugs should be expressed in relevant tissues under normal conditions. Further characterization of the remaining 13% of gene-disease pairs revealed that most genes are expressed in a different tissue linked to another disease. Our analysis demonstrates the value of extensive tissue specific expression resources.both in terms of tissue and cell diversity as well as techniques used to measure gene expression.
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spelling pubmed-50999362016-11-14 Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues Kumar, Vinod Sanseau, Philippe Simola, Daniel F. Hurle, Mark R. Agarwal, Pankaj Sci Rep Article It is commonly assumed that drug targets are expressed in tissues relevant to their indicated diseases, even under normal conditions. While multiple anecdotal cases support this hypothesis, a comprehensive study has not been performed to verify it. We conducted a systematic analysis to assess gene and protein expression for all targets of marketed and phase III drugs across a diverse collection of normal human tissues. For 87% of gene-disease pairs, the target is expressed in a disease-affected tissue under healthy conditions. This result validates the importance of confirming expression of a novel drug target in an appropriate tissue for each disease indication and strengthens previous findings showing that targets of efficacious drugs should be expressed in relevant tissues under normal conditions. Further characterization of the remaining 13% of gene-disease pairs revealed that most genes are expressed in a different tissue linked to another disease. Our analysis demonstrates the value of extensive tissue specific expression resources.both in terms of tissue and cell diversity as well as techniques used to measure gene expression. Nature Publishing Group 2016-11-08 /pmc/articles/PMC5099936/ /pubmed/27824084 http://dx.doi.org/10.1038/srep36205 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Kumar, Vinod
Sanseau, Philippe
Simola, Daniel F.
Hurle, Mark R.
Agarwal, Pankaj
Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
title Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
title_full Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
title_fullStr Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
title_full_unstemmed Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
title_short Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues
title_sort systematic analysis of drug targets confirms expression in disease-relevant tissues
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5099936/
https://www.ncbi.nlm.nih.gov/pubmed/27824084
http://dx.doi.org/10.1038/srep36205
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