Chromosome3D: reconstructing three-dimensional chromosomal structures from Hi-C interaction frequency data using distance geometry simulated annealing

BACKGROUND: Reconstructing three-dimensional structures of chromosomes is useful for visualizing their shapes in a cell and interpreting their function. In this work, we reconstruct chromosomal structures from Hi-C data by translating contact counts in Hi-C data into Euclidean distances between chro...

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Detalles Bibliográficos
Autores principales: Adhikari, Badri, Trieu, Tuan, Cheng, Jianlin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100196/
https://www.ncbi.nlm.nih.gov/pubmed/27821047
http://dx.doi.org/10.1186/s12864-016-3210-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5100196/
https://www.ncbi.nlm.nih.gov/pubmed/27821047
http://dx.doi.org/10.1186/s12864-016-3210-4

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