Cargando…
Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis
CRISPR/Cas9 is now regularly used for targeted mutagenesis in a wide variety of systems. Here we report the use of ribozymes for the generation of gRNAs both in vitro and in zebrafish embryos. We show that incorporation of ribozymes increases the types of promoters and number of target sites availab...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5104441/ https://www.ncbi.nlm.nih.gov/pubmed/27832146 http://dx.doi.org/10.1371/journal.pone.0166020 |
_version_ | 1782466748650356736 |
---|---|
author | Lee, Raymond Teck Ho Ng, Ashley Shu Mei Ingham, Philip W. |
author_facet | Lee, Raymond Teck Ho Ng, Ashley Shu Mei Ingham, Philip W. |
author_sort | Lee, Raymond Teck Ho |
collection | PubMed |
description | CRISPR/Cas9 is now regularly used for targeted mutagenesis in a wide variety of systems. Here we report the use of ribozymes for the generation of gRNAs both in vitro and in zebrafish embryos. We show that incorporation of ribozymes increases the types of promoters and number of target sites available for mutagenesis without compromising mutagenesis efficiency. We have tested this by comparing the efficiency of mutagenesis of gRNA constructs with and without ribozymes and also generated a transgenic zebrafish expressing gRNA using a heat shock promoter (RNA polymerase II-dependent promoter) that was able to induce mutagenesis of its target. Our method provides a streamlined approach to test gRNA efficiency as well as increasing the versatility of conditional gene knock out in zebrafish. |
format | Online Article Text |
id | pubmed-5104441 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-51044412016-12-08 Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis Lee, Raymond Teck Ho Ng, Ashley Shu Mei Ingham, Philip W. PLoS One Research Article CRISPR/Cas9 is now regularly used for targeted mutagenesis in a wide variety of systems. Here we report the use of ribozymes for the generation of gRNAs both in vitro and in zebrafish embryos. We show that incorporation of ribozymes increases the types of promoters and number of target sites available for mutagenesis without compromising mutagenesis efficiency. We have tested this by comparing the efficiency of mutagenesis of gRNA constructs with and without ribozymes and also generated a transgenic zebrafish expressing gRNA using a heat shock promoter (RNA polymerase II-dependent promoter) that was able to induce mutagenesis of its target. Our method provides a streamlined approach to test gRNA efficiency as well as increasing the versatility of conditional gene knock out in zebrafish. Public Library of Science 2016-11-10 /pmc/articles/PMC5104441/ /pubmed/27832146 http://dx.doi.org/10.1371/journal.pone.0166020 Text en © 2016 Lee et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Lee, Raymond Teck Ho Ng, Ashley Shu Mei Ingham, Philip W. Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis |
title | Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis |
title_full | Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis |
title_fullStr | Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis |
title_full_unstemmed | Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis |
title_short | Ribozyme Mediated gRNA Generation for In Vitro and In Vivo CRISPR/Cas9 Mutagenesis |
title_sort | ribozyme mediated grna generation for in vitro and in vivo crispr/cas9 mutagenesis |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5104441/ https://www.ncbi.nlm.nih.gov/pubmed/27832146 http://dx.doi.org/10.1371/journal.pone.0166020 |
work_keys_str_mv | AT leeraymondteckho ribozymemediatedgrnagenerationforinvitroandinvivocrisprcas9mutagenesis AT ngashleyshumei ribozymemediatedgrnagenerationforinvitroandinvivocrisprcas9mutagenesis AT inghamphilipw ribozymemediatedgrnagenerationforinvitroandinvivocrisprcas9mutagenesis |