Alignment-free Transcriptomic and Metatranscriptomic Comparison Using Sequencing Signatures with Variable Length Markov Chains

The comparison between microbial sequencing data is critical to understand the dynamics of microbial communities. The alignment-based tools analyzing metagenomic datasets require reference sequences and read alignments. The available alignment-free dissimilarity approaches model the background seque...

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Detalles Bibliográficos
Autores principales: Liao, Weinan, Ren, Jie, Wang, Kun, Wang, Shun, Zeng, Feng, Wang, Ying, Sun, Fengzhu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120338/
https://www.ncbi.nlm.nih.gov/pubmed/27876823
http://dx.doi.org/10.1038/srep37243

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5120338/
https://www.ncbi.nlm.nih.gov/pubmed/27876823
http://dx.doi.org/10.1038/srep37243

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