Cargando…
Reconstruction of ancestral RNA sequences under multiple structural constraints
BACKGROUND: Secondary structures form the scaffold of multiple sequence alignment of non-coding RNA (ncRNA) families. An accurate reconstruction of ancestral ncRNAs must use this structural signal. However, the inference of ancestors of a single ncRNA family with a single consensus structure may bia...
Autores principales: | Tremblay-Savard, Olivier, Reinharz, Vladimir, Waldispühl, Jérôme |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5123390/ https://www.ncbi.nlm.nih.gov/pubmed/28185557 http://dx.doi.org/10.1186/s12864-016-3105-4 |
Ejemplares similares
-
A weighted sampling algorithm for the design of RNA sequences with targeted secondary structure and nucleotide distribution
por: Reinharz, Vladimir, et al.
Publicado: (2013) -
RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data
por: Yao, Jason, et al.
Publicado: (2017) -
RNA-MoIP: prediction of RNA secondary structure and local 3D motifs from sequence data
por: Yao, Jason, et al.
Publicado: (2017) -
Combining structure probing data on RNA mutants with evolutionary information reveals RNA-binding interfaces
por: Reinharz, Vladimir, et al.
Publicado: (2016) -
Towards 3D structure prediction of large RNA molecules: an integer programming framework to insert local 3D motifs in RNA secondary structure
por: Reinharz, Vladimir, et al.
Publicado: (2012)