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Building pathway graphs from BioPAX data in R

Biological pathways are increasingly available in the BioPAX format which uses an RDF model for data storage. One can retrieve the information in this data model in the scripting language R using the package rBiopaxParser, which converts the BioPAX format to one readable in R. It also has a function...

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Detalles Bibliográficos
Autores principales: Benis, Nirupama, Schokker, Dirkjan, Kramer, Frank, Smits, Mari A., Suarez-Diez, Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5130076/
https://www.ncbi.nlm.nih.gov/pubmed/27990265
http://dx.doi.org/10.12688/f1000research.9582.2