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The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity

Mechanical integration of the nucleus with the extracellular matrix (ECM) is established by linkage between the cytoskeleton and the nucleus. This integration is hypothesized to mediate sensing of ECM rigidity, but parsing the function of nucleus-cytoskeleton linkage from other mechanisms has remain...

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Autores principales: Alam, Samer G., Zhang, Qiao, Prasad, Nripesh, Li, Yuan, Chamala, Srikar, Kuchibhotla, Ram, KC, Birendra, Aggarwal, Varun, Shrestha, Shristi, Jones, Angela L., Levy, Shawn E., Roux, Kyle J., Nickerson, Jeffrey A., Lele, Tanmay P.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131312/
https://www.ncbi.nlm.nih.gov/pubmed/27905489
http://dx.doi.org/10.1038/srep38063
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author Alam, Samer G.
Zhang, Qiao
Prasad, Nripesh
Li, Yuan
Chamala, Srikar
Kuchibhotla, Ram
KC, Birendra
Aggarwal, Varun
Shrestha, Shristi
Jones, Angela L.
Levy, Shawn E.
Roux, Kyle J.
Nickerson, Jeffrey A.
Lele, Tanmay P.
author_facet Alam, Samer G.
Zhang, Qiao
Prasad, Nripesh
Li, Yuan
Chamala, Srikar
Kuchibhotla, Ram
KC, Birendra
Aggarwal, Varun
Shrestha, Shristi
Jones, Angela L.
Levy, Shawn E.
Roux, Kyle J.
Nickerson, Jeffrey A.
Lele, Tanmay P.
author_sort Alam, Samer G.
collection PubMed
description Mechanical integration of the nucleus with the extracellular matrix (ECM) is established by linkage between the cytoskeleton and the nucleus. This integration is hypothesized to mediate sensing of ECM rigidity, but parsing the function of nucleus-cytoskeleton linkage from other mechanisms has remained a central challenge. Here we took advantage of the fact that the LINC (linker of nucleoskeleton and cytoskeleton) complex is a known molecular linker of the nucleus to the cytoskeleton, and asked how it regulates the sensitivity of genome-wide transcription to substratum rigidity. We show that gene mechanosensitivity is preserved after LINC disruption, but reversed in direction. Combined with myosin inhibition studies, we identify genes that depend on nuclear tension for their regulation. We also show that LINC disruption does not attenuate nuclear shape sensitivity to substrate rigidity. Our results show for the first time that the LINC complex facilitates mechano-regulation of expression across the genome.
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spelling pubmed-51313122016-12-15 The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity Alam, Samer G. Zhang, Qiao Prasad, Nripesh Li, Yuan Chamala, Srikar Kuchibhotla, Ram KC, Birendra Aggarwal, Varun Shrestha, Shristi Jones, Angela L. Levy, Shawn E. Roux, Kyle J. Nickerson, Jeffrey A. Lele, Tanmay P. Sci Rep Article Mechanical integration of the nucleus with the extracellular matrix (ECM) is established by linkage between the cytoskeleton and the nucleus. This integration is hypothesized to mediate sensing of ECM rigidity, but parsing the function of nucleus-cytoskeleton linkage from other mechanisms has remained a central challenge. Here we took advantage of the fact that the LINC (linker of nucleoskeleton and cytoskeleton) complex is a known molecular linker of the nucleus to the cytoskeleton, and asked how it regulates the sensitivity of genome-wide transcription to substratum rigidity. We show that gene mechanosensitivity is preserved after LINC disruption, but reversed in direction. Combined with myosin inhibition studies, we identify genes that depend on nuclear tension for their regulation. We also show that LINC disruption does not attenuate nuclear shape sensitivity to substrate rigidity. Our results show for the first time that the LINC complex facilitates mechano-regulation of expression across the genome. Nature Publishing Group 2016-12-01 /pmc/articles/PMC5131312/ /pubmed/27905489 http://dx.doi.org/10.1038/srep38063 Text en Copyright © 2016, The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Alam, Samer G.
Zhang, Qiao
Prasad, Nripesh
Li, Yuan
Chamala, Srikar
Kuchibhotla, Ram
KC, Birendra
Aggarwal, Varun
Shrestha, Shristi
Jones, Angela L.
Levy, Shawn E.
Roux, Kyle J.
Nickerson, Jeffrey A.
Lele, Tanmay P.
The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
title The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
title_full The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
title_fullStr The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
title_full_unstemmed The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
title_short The mammalian LINC complex regulates genome transcriptional responses to substrate rigidity
title_sort mammalian linc complex regulates genome transcriptional responses to substrate rigidity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131312/
https://www.ncbi.nlm.nih.gov/pubmed/27905489
http://dx.doi.org/10.1038/srep38063
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