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Centrifuge: rapid and sensitive classification of metagenomic sequences
Centrifuge is a novel microbial classification engine that enables rapid, accurate, and sensitive labeling of reads and quantification of species on desktop computers. The system uses an indexing scheme based on the Burrows-Wheeler transform (BWT) and the Ferragina-Manzini (FM) index, optimized spec...
Autores principales: | Kim, Daehwan, Song, Li, Breitwieser, Florian P., Salzberg, Steven L. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5131823/ https://www.ncbi.nlm.nih.gov/pubmed/27852649 http://dx.doi.org/10.1101/gr.210641.116 |
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