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STR-realigner: a realignment method for short tandem repeat regions

BACKGROUND: In the estimation of repeat numbers in a short tandem repeat (STR) region from high-throughput sequencing data, two types of strategies are mainly taken: a strategy based on counting repeat patterns included in sequence reads spanning the region and a strategy based on estimating the dif...

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Detalles Bibliográficos
Autores principales: Kojima, Kaname, Kawai, Yosuke, Misawa, Kazuharu, Mimori, Takahiro, Nagasaki, Masao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5135796/
https://www.ncbi.nlm.nih.gov/pubmed/27912743
http://dx.doi.org/10.1186/s12864-016-3294-x