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Data-driven outbreak forecasting with a simple nonlinear growth model

Recent events have thrown the spotlight on infectious disease outbreak response. We developed a data-driven method, EpiGro, which can be applied to cumulative case reports to estimate the order of magnitude of the duration, peak and ultimate size of an ongoing outbreak. It is based on a surprisingly...

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Detalles Bibliográficos
Autores principales: Lega, Joceline, Brown, Heidi E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Authors. Published by Elsevier B.V. 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5159251/
https://www.ncbi.nlm.nih.gov/pubmed/27770752
http://dx.doi.org/10.1016/j.epidem.2016.10.002
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author Lega, Joceline
Brown, Heidi E.
author_facet Lega, Joceline
Brown, Heidi E.
author_sort Lega, Joceline
collection PubMed
description Recent events have thrown the spotlight on infectious disease outbreak response. We developed a data-driven method, EpiGro, which can be applied to cumulative case reports to estimate the order of magnitude of the duration, peak and ultimate size of an ongoing outbreak. It is based on a surprisingly simple mathematical property of many epidemiological data sets, does not require knowledge or estimation of disease transmission parameters, is robust to noise and to small data sets, and runs quickly due to its mathematical simplicity. Using data from historic and ongoing epidemics, we present the model. We also provide modeling considerations that justify this approach and discuss its limitations. In the absence of other information or in conjunction with other models, EpiGro may be useful to public health responders.
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spelling pubmed-51592512017-12-01 Data-driven outbreak forecasting with a simple nonlinear growth model Lega, Joceline Brown, Heidi E. Epidemics Article Recent events have thrown the spotlight on infectious disease outbreak response. We developed a data-driven method, EpiGro, which can be applied to cumulative case reports to estimate the order of magnitude of the duration, peak and ultimate size of an ongoing outbreak. It is based on a surprisingly simple mathematical property of many epidemiological data sets, does not require knowledge or estimation of disease transmission parameters, is robust to noise and to small data sets, and runs quickly due to its mathematical simplicity. Using data from historic and ongoing epidemics, we present the model. We also provide modeling considerations that justify this approach and discuss its limitations. In the absence of other information or in conjunction with other models, EpiGro may be useful to public health responders. The Authors. Published by Elsevier B.V. 2016-12 2016-10-11 /pmc/articles/PMC5159251/ /pubmed/27770752 http://dx.doi.org/10.1016/j.epidem.2016.10.002 Text en © 2016 The Authors Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Lega, Joceline
Brown, Heidi E.
Data-driven outbreak forecasting with a simple nonlinear growth model
title Data-driven outbreak forecasting with a simple nonlinear growth model
title_full Data-driven outbreak forecasting with a simple nonlinear growth model
title_fullStr Data-driven outbreak forecasting with a simple nonlinear growth model
title_full_unstemmed Data-driven outbreak forecasting with a simple nonlinear growth model
title_short Data-driven outbreak forecasting with a simple nonlinear growth model
title_sort data-driven outbreak forecasting with a simple nonlinear growth model
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5159251/
https://www.ncbi.nlm.nih.gov/pubmed/27770752
http://dx.doi.org/10.1016/j.epidem.2016.10.002
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