Cargando…
A novel independence test for somatic alterations in cancer shows that biology drives mutual exclusivity but chance explains most co-occurrence
In cancer, mutually exclusive or co-occurring somatic alterations across genes can suggest functional interactions. Existing tests for such patterns make the unrealistic assumption of identical gene alteration probabilities across tumors. We present Discrete Independence Statistic Controlling for Ob...
Autores principales: | Canisius, Sander, Martens, John W. M., Wessels, Lodewyk F. A. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5162102/ https://www.ncbi.nlm.nih.gov/pubmed/27986087 http://dx.doi.org/10.1186/s13059-016-1114-x |
Ejemplares similares
-
Systematic identification of cancer driving signaling pathways based on mutual exclusivity of genomic alterations
por: Babur, Özgün, et al.
Publicado: (2015) -
CoMEt: a statistical approach to identify combinations of mutually exclusive alterations in cancer
por: Leiserson, Mark DM, et al.
Publicado: (2015) -
Molecular characterization of breast and lung tumors by integration of multiple data types with functional sparse-factor analysis
por: Bismeijer, Tycho, et al.
Publicado: (2018) -
Mutually exclusive STAT1 modifications identified by Ubc9/substrate dimerization-dependent SUMOylation
por: Zimnik, Susan, et al.
Publicado: (2009) -
Codependency and mutual exclusivity for gene community detection from sparse single-cell transcriptome data
por: Nakajima, Natsu, et al.
Publicado: (2021)