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Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker
Galectin-8 (Gal-8) plays a significant role in normal immunological function as well as in cancer. This lectin contains two carbohydrate recognition domains (CRD) connected by a peptide linker. The N-terminal CRD determines ligand binding specificity, whereas the linker has been proposed to regulate...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5187888/ https://www.ncbi.nlm.nih.gov/pubmed/27973456 http://dx.doi.org/10.3390/ijms17122088 |
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author | Si, Yunlong Wang, Yue Gao, Jin Song, Chenyang Feng, Shiqiong Zhou, Yifa Tai, Guihua Su, Jiyong |
author_facet | Si, Yunlong Wang, Yue Gao, Jin Song, Chenyang Feng, Shiqiong Zhou, Yifa Tai, Guihua Su, Jiyong |
author_sort | Si, Yunlong |
collection | PubMed |
description | Galectin-8 (Gal-8) plays a significant role in normal immunological function as well as in cancer. This lectin contains two carbohydrate recognition domains (CRD) connected by a peptide linker. The N-terminal CRD determines ligand binding specificity, whereas the linker has been proposed to regulate overall Gal-8 function, including multimerization and biological activity. Here, we crystallized the Gal-8 N-terminal CRD with the peptide linker using a crystallization condition that contains Ni(2+). The Ni(2+) ion was found to be complexed between two CRDs via crystal packing contacts. The coordination between Ni(2+) and Asp25 plays an indirect role in determining the structure of β-strand F0 and in influencing the linker conformation which could not be defined due to its dynamic nature. The linker was also shortened in situ and crystallized under a different condition, leading to a higher resolution structure refined to 1.08 Å. This crystal structure allowed definition of a short portion of the linker interacting with the Gal-8 N-terminal tail via ionic interactions and hydrogen bonds. Observation of two Gal-8 N-terminal CRD structures implies that the N-terminal tail and the linker may influence each other’s conformation. In addition, under specific crystallization conditions, glycerol could replace lactose and was observed at the carbohydrate binding site. However, glycerol did not show inhibition activity in hemagglutination assay. |
format | Online Article Text |
id | pubmed-5187888 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-51878882016-12-30 Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker Si, Yunlong Wang, Yue Gao, Jin Song, Chenyang Feng, Shiqiong Zhou, Yifa Tai, Guihua Su, Jiyong Int J Mol Sci Article Galectin-8 (Gal-8) plays a significant role in normal immunological function as well as in cancer. This lectin contains two carbohydrate recognition domains (CRD) connected by a peptide linker. The N-terminal CRD determines ligand binding specificity, whereas the linker has been proposed to regulate overall Gal-8 function, including multimerization and biological activity. Here, we crystallized the Gal-8 N-terminal CRD with the peptide linker using a crystallization condition that contains Ni(2+). The Ni(2+) ion was found to be complexed between two CRDs via crystal packing contacts. The coordination between Ni(2+) and Asp25 plays an indirect role in determining the structure of β-strand F0 and in influencing the linker conformation which could not be defined due to its dynamic nature. The linker was also shortened in situ and crystallized under a different condition, leading to a higher resolution structure refined to 1.08 Å. This crystal structure allowed definition of a short portion of the linker interacting with the Gal-8 N-terminal tail via ionic interactions and hydrogen bonds. Observation of two Gal-8 N-terminal CRD structures implies that the N-terminal tail and the linker may influence each other’s conformation. In addition, under specific crystallization conditions, glycerol could replace lactose and was observed at the carbohydrate binding site. However, glycerol did not show inhibition activity in hemagglutination assay. MDPI 2016-12-12 /pmc/articles/PMC5187888/ /pubmed/27973456 http://dx.doi.org/10.3390/ijms17122088 Text en © 2016 by the authors; licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC-BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Si, Yunlong Wang, Yue Gao, Jin Song, Chenyang Feng, Shiqiong Zhou, Yifa Tai, Guihua Su, Jiyong Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker |
title | Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker |
title_full | Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker |
title_fullStr | Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker |
title_full_unstemmed | Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker |
title_short | Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker |
title_sort | crystallization of galectin-8 linker reveals intricate relationship between the n-terminal tail and the linker |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5187888/ https://www.ncbi.nlm.nih.gov/pubmed/27973456 http://dx.doi.org/10.3390/ijms17122088 |
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