Accelerating metagenomic read classification on CUDA-enabled GPUs

BACKGROUND: Metagenomic sequencing studies are becoming increasingly popular with prominent examples including the sequencing of human microbiomes and diverse environments. A fundamental computational problem in this context is read classification; i.e. the assignment of each read to a taxonomic lab...

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Detalles Bibliográficos
Autores principales: Kobus, Robin, Hundt, Christian, Müller, André, Schmidt, Bertil
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5209836/
https://www.ncbi.nlm.nih.gov/pubmed/28049411
http://dx.doi.org/10.1186/s12859-016-1434-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5209836/
https://www.ncbi.nlm.nih.gov/pubmed/28049411
http://dx.doi.org/10.1186/s12859-016-1434-6

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