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Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker

Immunoglobulin M multiple myeloma (IgM MM) is an extremely rare subtype of multiple myeloma with a poor clinical outcome. In this study, bone marrow aspirates of MM patients, including two cases of IgM MM, were analyzed by whole exome sequencing and RNA sequencing. Recurrent somatic mutations in the...

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Autores principales: Ryu, Daeun, Kim, Hee Jin, Joung, Je-Gun, Lee, Hae-Ock, Bae, Joon Seol, Kim, Seok Jin, Kim, Haesu, Park, Woong-Yang, Kim, Kihyun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216929/
https://www.ncbi.nlm.nih.gov/pubmed/27223072
http://dx.doi.org/10.18632/oncotarget.9478
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author Ryu, Daeun
Kim, Hee Jin
Joung, Je-Gun
Lee, Hae-Ock
Bae, Joon Seol
Kim, Seok Jin
Kim, Haesu
Park, Woong-Yang
Kim, Kihyun
author_facet Ryu, Daeun
Kim, Hee Jin
Joung, Je-Gun
Lee, Hae-Ock
Bae, Joon Seol
Kim, Seok Jin
Kim, Haesu
Park, Woong-Yang
Kim, Kihyun
author_sort Ryu, Daeun
collection PubMed
description Immunoglobulin M multiple myeloma (IgM MM) is an extremely rare subtype of multiple myeloma with a poor clinical outcome. In this study, bone marrow aspirates of MM patients, including two cases of IgM MM, were analyzed by whole exome sequencing and RNA sequencing. Recurrent somatic mutations in the NRAS, KRAS, CCND1, DIS3, and TP53 genes were found in IgM MM and other types of MM, in agreement with previous studies. Overall transcription profiles of IgM and other types of MM clustered together, but separate from normal blood or peripheral plasma cells. Among the differentially expressed genes in IgM MM, IRF4 was highly expressed in IgM as well as in a subset of other types of MM patients. Thus, IRF4 is an independent prognostic factor for general MM patients. Taken together, the somatic mutation and transcriptome profiles support the idea that IgM MM can be classified as an aggressive MM subtype.
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spelling pubmed-52169292017-01-17 Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker Ryu, Daeun Kim, Hee Jin Joung, Je-Gun Lee, Hae-Ock Bae, Joon Seol Kim, Seok Jin Kim, Haesu Park, Woong-Yang Kim, Kihyun Oncotarget Research Paper Immunoglobulin M multiple myeloma (IgM MM) is an extremely rare subtype of multiple myeloma with a poor clinical outcome. In this study, bone marrow aspirates of MM patients, including two cases of IgM MM, were analyzed by whole exome sequencing and RNA sequencing. Recurrent somatic mutations in the NRAS, KRAS, CCND1, DIS3, and TP53 genes were found in IgM MM and other types of MM, in agreement with previous studies. Overall transcription profiles of IgM and other types of MM clustered together, but separate from normal blood or peripheral plasma cells. Among the differentially expressed genes in IgM MM, IRF4 was highly expressed in IgM as well as in a subset of other types of MM patients. Thus, IRF4 is an independent prognostic factor for general MM patients. Taken together, the somatic mutation and transcriptome profiles support the idea that IgM MM can be classified as an aggressive MM subtype. Impact Journals LLC 2016-05-19 /pmc/articles/PMC5216929/ /pubmed/27223072 http://dx.doi.org/10.18632/oncotarget.9478 Text en Copyright: © 2016 Ryu et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Ryu, Daeun
Kim, Hee Jin
Joung, Je-Gun
Lee, Hae-Ock
Bae, Joon Seol
Kim, Seok Jin
Kim, Haesu
Park, Woong-Yang
Kim, Kihyun
Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
title Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
title_full Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
title_fullStr Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
title_full_unstemmed Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
title_short Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
title_sort comprehensive genomic profiling of igm multiple myeloma identifies irf4 as a prognostic marker
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216929/
https://www.ncbi.nlm.nih.gov/pubmed/27223072
http://dx.doi.org/10.18632/oncotarget.9478
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