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Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker
Immunoglobulin M multiple myeloma (IgM MM) is an extremely rare subtype of multiple myeloma with a poor clinical outcome. In this study, bone marrow aspirates of MM patients, including two cases of IgM MM, were analyzed by whole exome sequencing and RNA sequencing. Recurrent somatic mutations in the...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216929/ https://www.ncbi.nlm.nih.gov/pubmed/27223072 http://dx.doi.org/10.18632/oncotarget.9478 |
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author | Ryu, Daeun Kim, Hee Jin Joung, Je-Gun Lee, Hae-Ock Bae, Joon Seol Kim, Seok Jin Kim, Haesu Park, Woong-Yang Kim, Kihyun |
author_facet | Ryu, Daeun Kim, Hee Jin Joung, Je-Gun Lee, Hae-Ock Bae, Joon Seol Kim, Seok Jin Kim, Haesu Park, Woong-Yang Kim, Kihyun |
author_sort | Ryu, Daeun |
collection | PubMed |
description | Immunoglobulin M multiple myeloma (IgM MM) is an extremely rare subtype of multiple myeloma with a poor clinical outcome. In this study, bone marrow aspirates of MM patients, including two cases of IgM MM, were analyzed by whole exome sequencing and RNA sequencing. Recurrent somatic mutations in the NRAS, KRAS, CCND1, DIS3, and TP53 genes were found in IgM MM and other types of MM, in agreement with previous studies. Overall transcription profiles of IgM and other types of MM clustered together, but separate from normal blood or peripheral plasma cells. Among the differentially expressed genes in IgM MM, IRF4 was highly expressed in IgM as well as in a subset of other types of MM patients. Thus, IRF4 is an independent prognostic factor for general MM patients. Taken together, the somatic mutation and transcriptome profiles support the idea that IgM MM can be classified as an aggressive MM subtype. |
format | Online Article Text |
id | pubmed-5216929 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-52169292017-01-17 Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker Ryu, Daeun Kim, Hee Jin Joung, Je-Gun Lee, Hae-Ock Bae, Joon Seol Kim, Seok Jin Kim, Haesu Park, Woong-Yang Kim, Kihyun Oncotarget Research Paper Immunoglobulin M multiple myeloma (IgM MM) is an extremely rare subtype of multiple myeloma with a poor clinical outcome. In this study, bone marrow aspirates of MM patients, including two cases of IgM MM, were analyzed by whole exome sequencing and RNA sequencing. Recurrent somatic mutations in the NRAS, KRAS, CCND1, DIS3, and TP53 genes were found in IgM MM and other types of MM, in agreement with previous studies. Overall transcription profiles of IgM and other types of MM clustered together, but separate from normal blood or peripheral plasma cells. Among the differentially expressed genes in IgM MM, IRF4 was highly expressed in IgM as well as in a subset of other types of MM patients. Thus, IRF4 is an independent prognostic factor for general MM patients. Taken together, the somatic mutation and transcriptome profiles support the idea that IgM MM can be classified as an aggressive MM subtype. Impact Journals LLC 2016-05-19 /pmc/articles/PMC5216929/ /pubmed/27223072 http://dx.doi.org/10.18632/oncotarget.9478 Text en Copyright: © 2016 Ryu et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Ryu, Daeun Kim, Hee Jin Joung, Je-Gun Lee, Hae-Ock Bae, Joon Seol Kim, Seok Jin Kim, Haesu Park, Woong-Yang Kim, Kihyun Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker |
title | Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker |
title_full | Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker |
title_fullStr | Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker |
title_full_unstemmed | Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker |
title_short | Comprehensive genomic profiling of IgM multiple myeloma identifies IRF4 as a prognostic marker |
title_sort | comprehensive genomic profiling of igm multiple myeloma identifies irf4 as a prognostic marker |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5216929/ https://www.ncbi.nlm.nih.gov/pubmed/27223072 http://dx.doi.org/10.18632/oncotarget.9478 |
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