Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods

BACKGROUND: Whole genome sequencing (WGS) is increasingly used in diagnostics and surveillance of infectious diseases. A major application for WGS is to use the data for identifying outbreak clusters, and there is therefore a need for methods that can accurately and efficiently infer phylogenies fro...

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Detalles Bibliográficos
Autores principales: Ahrenfeldt, Johanne, Skaarup, Carina, Hasman, Henrik, Pedersen, Anders Gorm, Aarestrup, Frank Møller, Lund, Ole
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217230/
https://www.ncbi.nlm.nih.gov/pubmed/28056767
http://dx.doi.org/10.1186/s12864-016-3407-6

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217230/
https://www.ncbi.nlm.nih.gov/pubmed/28056767
http://dx.doi.org/10.1186/s12864-016-3407-6

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