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Bacterial whole genome-based phylogeny: construction of a new benchmarking dataset and assessment of some existing methods
BACKGROUND: Whole genome sequencing (WGS) is increasingly used in diagnostics and surveillance of infectious diseases. A major application for WGS is to use the data for identifying outbreak clusters, and there is therefore a need for methods that can accurately and efficiently infer phylogenies fro...
Autores principales: | Ahrenfeldt, Johanne, Skaarup, Carina, Hasman, Henrik, Pedersen, Anders Gorm, Aarestrup, Frank Møller, Lund, Ole |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5217230/ https://www.ncbi.nlm.nih.gov/pubmed/28056767 http://dx.doi.org/10.1186/s12864-016-3407-6 |
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