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Using reference-free compressed data structures to analyze sequencing reads from thousands of human genomes
We are rapidly approaching the point where we have sequenced millions of human genomes. There is a pressing need for new data structures to store raw sequencing data and efficient algorithms for population scale analysis. Current reference-based data formats do not fully exploit the redundancy in po...
Autores principales: | Dolle, Dirk D., Liu, Zhicheng, Cotten, Matthew, Simpson, Jared T., Iqbal, Zamin, Durbin, Richard, McCarthy, Shane A., Keane, Thomas M. |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5287235/ https://www.ncbi.nlm.nih.gov/pubmed/27986821 http://dx.doi.org/10.1101/gr.211748.116 |
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