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Two p53 tetramers bind one consensus DNA response element

p53 tumor suppressor is a transcription factor that controls cell cycle and genetic integrity. In response to genotoxic stress p53 activates DNA repair, cell cycle arrest, apoptosis or senescence, which are initiated via p53 binding to its specific DNA response elements (RE). The consensus p53 DNA R...

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Autores principales: Kearns, Sinéad, Lurz, Rudi, Orlova, Elena V., Okorokov, Andrei L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5291249/
https://www.ncbi.nlm.nih.gov/pubmed/27034469
http://dx.doi.org/10.1093/nar/gkw215
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author Kearns, Sinéad
Lurz, Rudi
Orlova, Elena V.
Okorokov, Andrei L.
author_facet Kearns, Sinéad
Lurz, Rudi
Orlova, Elena V.
Okorokov, Andrei L.
author_sort Kearns, Sinéad
collection PubMed
description p53 tumor suppressor is a transcription factor that controls cell cycle and genetic integrity. In response to genotoxic stress p53 activates DNA repair, cell cycle arrest, apoptosis or senescence, which are initiated via p53 binding to its specific DNA response elements (RE). The consensus p53 DNA RE consists of two decameric palindromic half-site sequences. Crystallographic studies have demonstrated that two isolated p53 DNA-binding core domains interact with one half-site of the p53 DNA REs suggesting that one p53 tetramer is bound to one RE. However, our recent 3D cryo-EM studies showed that the full-length p53 tetramer is bound to only one half-site of RE. Here, we have used biochemical and electron microscopy (EM) methods to analyze DNA-binding of human and murine p53 tetramers to various p53 DNA REs. Our new results demonstrate that two p53 tetramers can interact sequence-specifically with one DNA RE at the same time. In particular, the EM structural analysis revealed that two p53 tetramers bind one DNA RE simultaneously with DNA positioned between them. These results demonstrate a mode different from that assumed previously for the p53-DNA interaction and suggest important biological implications on p53 activity as a transcriptional regulator of cellular response to stress.
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spelling pubmed-52912492017-02-10 Two p53 tetramers bind one consensus DNA response element Kearns, Sinéad Lurz, Rudi Orlova, Elena V. Okorokov, Andrei L. Nucleic Acids Res Gene regulation, Chromatin and Epigenetics p53 tumor suppressor is a transcription factor that controls cell cycle and genetic integrity. In response to genotoxic stress p53 activates DNA repair, cell cycle arrest, apoptosis or senescence, which are initiated via p53 binding to its specific DNA response elements (RE). The consensus p53 DNA RE consists of two decameric palindromic half-site sequences. Crystallographic studies have demonstrated that two isolated p53 DNA-binding core domains interact with one half-site of the p53 DNA REs suggesting that one p53 tetramer is bound to one RE. However, our recent 3D cryo-EM studies showed that the full-length p53 tetramer is bound to only one half-site of RE. Here, we have used biochemical and electron microscopy (EM) methods to analyze DNA-binding of human and murine p53 tetramers to various p53 DNA REs. Our new results demonstrate that two p53 tetramers can interact sequence-specifically with one DNA RE at the same time. In particular, the EM structural analysis revealed that two p53 tetramers bind one DNA RE simultaneously with DNA positioned between them. These results demonstrate a mode different from that assumed previously for the p53-DNA interaction and suggest important biological implications on p53 activity as a transcriptional regulator of cellular response to stress. Oxford University Press 2016-07-27 2016-03-31 /pmc/articles/PMC5291249/ /pubmed/27034469 http://dx.doi.org/10.1093/nar/gkw215 Text en © The Author(s) 2016. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Gene regulation, Chromatin and Epigenetics
Kearns, Sinéad
Lurz, Rudi
Orlova, Elena V.
Okorokov, Andrei L.
Two p53 tetramers bind one consensus DNA response element
title Two p53 tetramers bind one consensus DNA response element
title_full Two p53 tetramers bind one consensus DNA response element
title_fullStr Two p53 tetramers bind one consensus DNA response element
title_full_unstemmed Two p53 tetramers bind one consensus DNA response element
title_short Two p53 tetramers bind one consensus DNA response element
title_sort two p53 tetramers bind one consensus dna response element
topic Gene regulation, Chromatin and Epigenetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5291249/
https://www.ncbi.nlm.nih.gov/pubmed/27034469
http://dx.doi.org/10.1093/nar/gkw215
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