Phylogenetic factorization of compositional data yields lineage-level associations in microbiome datasets

Marker gene sequencing of microbial communities has generated big datasets of microbial relative abundances varying across environmental conditions, sample sites and treatments. These data often come with putative phylogenies, providing unique opportunities to investigate how shared evolutionary his...

Cur síos iomlán

Sonraí bibleagrafaíochta
Príomhchruthaitheoirí: Washburne, Alex D., Silverman, Justin D., Leff, Jonathan W., Bennett, Dominic J., Darcy, John L., Mukherjee, Sayan, Fierer, Noah, David, Lawrence A.
Formáid: Online Alt Téacs
Teanga:English
Foilsithe / Cruthaithe: PeerJ Inc. 2017
Ábhair:
Computational Biology
Rochtain ar líne:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5345826/
https://www.ncbi.nlm.nih.gov/pubmed/28289558
http://dx.doi.org/10.7717/peerj.2969

Ar líne

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5345826/
https://www.ncbi.nlm.nih.gov/pubmed/28289558
http://dx.doi.org/10.7717/peerj.2969

Míreanna comhchosúla