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A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases
Afatinib (systematic name: N-{4-(3-chloro-4-fluoroanilino)-7-[(tetrahydrofuran-3-yl)oxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide), is a specific inhibitor of the ErbB family of tyrosine kinases. The free base form crystallizes from acetonitrile as a mixed water–acetonitrile solvent,...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347068/ https://www.ncbi.nlm.nih.gov/pubmed/28316823 http://dx.doi.org/10.1107/S2056989017002626 |
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author | Zeller, Matthias de Araujo, Gabriel Lima Barros Parker, Trev Singh Rai, Amrinder Byrn, Stephen R. |
author_facet | Zeller, Matthias de Araujo, Gabriel Lima Barros Parker, Trev Singh Rai, Amrinder Byrn, Stephen R. |
author_sort | Zeller, Matthias |
collection | PubMed |
description | Afatinib (systematic name: N-{4-(3-chloro-4-fluoroanilino)-7-[(tetrahydrofuran-3-yl)oxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide), is a specific inhibitor of the ErbB family of tyrosine kinases. The free base form crystallizes from acetonitrile as a mixed water–acetonitrile solvent, C(24)H(25)ClFN(5)O(3)·0.25C(2)H(3)N·2H(2)O. It crystallizes with two independent molecules (A and B) in the asymmetric unit of the chiral space group P42(1)2, but exhibits close to perfect pseudo-inversion symmetry, emulating P4/ncc that relates the two molecules to each other. Exact inversion symmetry is however broken by swapping of oxygen and CH(2) moieties of the outer tetrahydrofuranyl substituents of the two independent molecules. This can, in turn, be traced back to C—H⋯N and C—H⋯O interactions of the acetonitrile solvent molecules with the tetrahydrofuran oxygen and CH(2) units. In the crystal, neighboring molecules are connected via N—H⋯O hydrogen bonds between the secondary amine and the amide keto O atom. Additional hydrogen bonds are formed through the water solvent molecules, which are engaged in O—H⋯O and O—H⋯N hydrogen bonds connecting to the dimethylamino N atom, the amide keto O atom, and one of the quinazoline N atoms of a neighboring molecule, leading to an intricate three-dimensional hydrogen-bonded superstructure. There are two types of channels stretching along the direction of the c axis; one along the fourfold rotational axis, occupied by acetonitrile solvent molecules situated on that axis, and parallel channels which are not occupied by any solvent. |
format | Online Article Text |
id | pubmed-5347068 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-53470682017-03-17 A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases Zeller, Matthias de Araujo, Gabriel Lima Barros Parker, Trev Singh Rai, Amrinder Byrn, Stephen R. Acta Crystallogr E Crystallogr Commun Research Communications Afatinib (systematic name: N-{4-(3-chloro-4-fluoroanilino)-7-[(tetrahydrofuran-3-yl)oxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide), is a specific inhibitor of the ErbB family of tyrosine kinases. The free base form crystallizes from acetonitrile as a mixed water–acetonitrile solvent, C(24)H(25)ClFN(5)O(3)·0.25C(2)H(3)N·2H(2)O. It crystallizes with two independent molecules (A and B) in the asymmetric unit of the chiral space group P42(1)2, but exhibits close to perfect pseudo-inversion symmetry, emulating P4/ncc that relates the two molecules to each other. Exact inversion symmetry is however broken by swapping of oxygen and CH(2) moieties of the outer tetrahydrofuranyl substituents of the two independent molecules. This can, in turn, be traced back to C—H⋯N and C—H⋯O interactions of the acetonitrile solvent molecules with the tetrahydrofuran oxygen and CH(2) units. In the crystal, neighboring molecules are connected via N—H⋯O hydrogen bonds between the secondary amine and the amide keto O atom. Additional hydrogen bonds are formed through the water solvent molecules, which are engaged in O—H⋯O and O—H⋯N hydrogen bonds connecting to the dimethylamino N atom, the amide keto O atom, and one of the quinazoline N atoms of a neighboring molecule, leading to an intricate three-dimensional hydrogen-bonded superstructure. There are two types of channels stretching along the direction of the c axis; one along the fourfold rotational axis, occupied by acetonitrile solvent molecules situated on that axis, and parallel channels which are not occupied by any solvent. International Union of Crystallography 2017-02-21 /pmc/articles/PMC5347068/ /pubmed/28316823 http://dx.doi.org/10.1107/S2056989017002626 Text en © Zeller et al. 2017 http://creativecommons.org/licenses/by/2.0/uk/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/2.0/uk/ |
spellingShingle | Research Communications Zeller, Matthias de Araujo, Gabriel Lima Barros Parker, Trev Singh Rai, Amrinder Byrn, Stephen R. A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases |
title | A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases |
title_full | A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases |
title_fullStr | A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases |
title_full_unstemmed | A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases |
title_short | A new solvate of afatinib, a specific inhibitor of the ErbB family of tyrosine kinases |
title_sort | new solvate of afatinib, a specific inhibitor of the erbb family of tyrosine kinases |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5347068/ https://www.ncbi.nlm.nih.gov/pubmed/28316823 http://dx.doi.org/10.1107/S2056989017002626 |
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