QuickMIRSeq: a pipeline for quick and accurate quantification of both known miRNAs and isomiRs by jointly processing multiple samples from microRNA sequencing

BACKGROUND: Genome-wide miRNA expression data can be used to study miRNA dysregulation comprehensively. Although many open-source tools for microRNA (miRNA)-seq data analyses are available, challenges remain in accurate miRNA quantification from large-scale miRNA-seq dataset. We implemented a pipeli...

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Detalles Bibliográficos
Autores principales: Zhao, Shanrong, Gordon, William, Du, Sarah, Zhang, Chi, He, Wen, Xi, Li, Mathur, Sachin, Agostino, Michael, Paradis, Theresa, von Schack, David, Vincent, Michael, Zhang, Baohong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359966/
https://www.ncbi.nlm.nih.gov/pubmed/28320324
http://dx.doi.org/10.1186/s12859-017-1601-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5359966/
https://www.ncbi.nlm.nih.gov/pubmed/28320324
http://dx.doi.org/10.1186/s12859-017-1601-4

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