ROCker: accurate detection and quantification of target genes in short-read metagenomic data sets by modeling sliding-window bitscores

Functional annotation of metagenomic and metatranscriptomic data sets relies on similarity searches based on e-value thresholds resulting in an unknown number of false positive and negative matches. To overcome these limitations, we introduce ROCker, aimed at identifying position-specific, most-disc...

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Detalles Bibliográficos
Autores principales: Orellana, Luis H., Rodriguez-R, Luis M., Konstantinidis, Konstantinos T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Methods Online
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5388429/
https://www.ncbi.nlm.nih.gov/pubmed/28180325
http://dx.doi.org/10.1093/nar/gkw900

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5388429/
https://www.ncbi.nlm.nih.gov/pubmed/28180325
http://dx.doi.org/10.1093/nar/gkw900

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