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Discovery and validation of information theory-based transcription factor and cofactor binding site motifs

Data from ChIP-seq experiments can derive the genome-wide binding specificities of transcription factors (TFs) and other regulatory proteins. We analyzed 765 ENCODE ChIP-seq peak datasets of 207 human TFs with a novel motif discovery pipeline based on recursive, thresholded entropy minimization. Thi...

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Detalles Bibliográficos
Autores principales: Lu, Ruipeng, Mucaki, Eliseos J., Rogan, Peter K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5389469/
https://www.ncbi.nlm.nih.gov/pubmed/27899659
http://dx.doi.org/10.1093/nar/gkw1036