Intersect-then-combine approach: improving the performance of somatic variant calling in whole exome sequencing data using multiple aligners and callers

Bioinformatic analysis of genomic sequencing data to identify somatic mutations in cancer samples is far from achieving the required robustness and standardisation. In this study we generated a whole exome sequencing benchmark dataset using the platinum genome sample NA12878 and developed an interse...

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Detalles Bibliográficos
Autores principales: Callari, Maurizio, Sammut, Stephen-John, De Mattos-Arruda, Leticia, Bruna, Alejandra, Rueda, Oscar M., Chin, Suet-Feung, Caldas, Carlos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5394620/
https://www.ncbi.nlm.nih.gov/pubmed/28420412
http://dx.doi.org/10.1186/s13073-017-0425-1

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5394620/
https://www.ncbi.nlm.nih.gov/pubmed/28420412
http://dx.doi.org/10.1186/s13073-017-0425-1

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