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ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins
Adenosine deaminases acting on RNA (ADARs) catalyze the editing of adenosine residues to inosine (A-to-I) within RNA sequences, mostly in the introns and UTRs (un-translated regions). The significance of editing within non-coding regions of RNA is poorly understood. Here, we demonstrate that associa...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397167/ https://www.ncbi.nlm.nih.gov/pubmed/28053121 http://dx.doi.org/10.1093/nar/gkw1304 |
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author | Anantharaman, Aparna Tripathi, Vidisha Khan, Abid Yoon, Je-Hyun Singh, Deepak K. Gholamalamdari, Omid Guang, Shuomeng Ohlson, Johan Wahlstedt, Helene Öhman, Marie Jantsch, Michael F. Conrad, Nicholas K. Ma, Jian Gorospe, Myriam Prasanth, Supriya G. Prasanth, Kannanganattu V. |
author_facet | Anantharaman, Aparna Tripathi, Vidisha Khan, Abid Yoon, Je-Hyun Singh, Deepak K. Gholamalamdari, Omid Guang, Shuomeng Ohlson, Johan Wahlstedt, Helene Öhman, Marie Jantsch, Michael F. Conrad, Nicholas K. Ma, Jian Gorospe, Myriam Prasanth, Supriya G. Prasanth, Kannanganattu V. |
author_sort | Anantharaman, Aparna |
collection | PubMed |
description | Adenosine deaminases acting on RNA (ADARs) catalyze the editing of adenosine residues to inosine (A-to-I) within RNA sequences, mostly in the introns and UTRs (un-translated regions). The significance of editing within non-coding regions of RNA is poorly understood. Here, we demonstrate that association of ADAR2 with RNA stabilizes a subset of transcripts. ADAR2 interacts with and edits the 3΄UTR of nuclear-retained Cat2 transcribed nuclear RNA (Ctn RNA). In absence of ADAR2, the abundance and half-life of Ctn RNA are significantly reduced. Furthermore, ADAR2-mediated stabilization of Ctn RNA occurred in an editing-independent manner. Unedited Ctn RNA shows enhanced interaction with the RNA-binding proteins HuR and PARN [Poly(A) specific ribonuclease deadenylase]. HuR and PARN destabilize Ctn RNA in absence of ADAR2, indicating that ADAR2 stabilizes Ctn RNA by antagonizing its degradation by PARN and HuR. Transcriptomic analysis identified other RNAs that are regulated by a similar mechanism. In summary, we identify a regulatory mechanism whereby ADAR2 enhances target RNA stability by limiting the interaction of RNA-destabilizing proteins with their cognate substrates. |
format | Online Article Text |
id | pubmed-5397167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-53971672017-04-24 ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins Anantharaman, Aparna Tripathi, Vidisha Khan, Abid Yoon, Je-Hyun Singh, Deepak K. Gholamalamdari, Omid Guang, Shuomeng Ohlson, Johan Wahlstedt, Helene Öhman, Marie Jantsch, Michael F. Conrad, Nicholas K. Ma, Jian Gorospe, Myriam Prasanth, Supriya G. Prasanth, Kannanganattu V. Nucleic Acids Res RNA Adenosine deaminases acting on RNA (ADARs) catalyze the editing of adenosine residues to inosine (A-to-I) within RNA sequences, mostly in the introns and UTRs (un-translated regions). The significance of editing within non-coding regions of RNA is poorly understood. Here, we demonstrate that association of ADAR2 with RNA stabilizes a subset of transcripts. ADAR2 interacts with and edits the 3΄UTR of nuclear-retained Cat2 transcribed nuclear RNA (Ctn RNA). In absence of ADAR2, the abundance and half-life of Ctn RNA are significantly reduced. Furthermore, ADAR2-mediated stabilization of Ctn RNA occurred in an editing-independent manner. Unedited Ctn RNA shows enhanced interaction with the RNA-binding proteins HuR and PARN [Poly(A) specific ribonuclease deadenylase]. HuR and PARN destabilize Ctn RNA in absence of ADAR2, indicating that ADAR2 stabilizes Ctn RNA by antagonizing its degradation by PARN and HuR. Transcriptomic analysis identified other RNAs that are regulated by a similar mechanism. In summary, we identify a regulatory mechanism whereby ADAR2 enhances target RNA stability by limiting the interaction of RNA-destabilizing proteins with their cognate substrates. Oxford University Press 2017-04-20 2017-01-04 /pmc/articles/PMC5397167/ /pubmed/28053121 http://dx.doi.org/10.1093/nar/gkw1304 Text en © The Author(s) 2017. Published by Oxford University Press on behalf of Nucleic Acids Research. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | RNA Anantharaman, Aparna Tripathi, Vidisha Khan, Abid Yoon, Je-Hyun Singh, Deepak K. Gholamalamdari, Omid Guang, Shuomeng Ohlson, Johan Wahlstedt, Helene Öhman, Marie Jantsch, Michael F. Conrad, Nicholas K. Ma, Jian Gorospe, Myriam Prasanth, Supriya G. Prasanth, Kannanganattu V. ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins |
title | ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins |
title_full | ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins |
title_fullStr | ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins |
title_full_unstemmed | ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins |
title_short | ADAR2 regulates RNA stability by modifying access of decay-promoting RNA-binding proteins |
title_sort | adar2 regulates rna stability by modifying access of decay-promoting rna-binding proteins |
topic | RNA |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5397167/ https://www.ncbi.nlm.nih.gov/pubmed/28053121 http://dx.doi.org/10.1093/nar/gkw1304 |
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