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Ordinary differential equations and Boolean networks in application to modelling of 6-mercaptopurine metabolism

We consider two approaches to modelling the cell metabolism of 6-mercaptopurine, one of the important chemotherapy drugs used for treating acute lymphocytic leukaemia: kinetic ordinary differential equations, and Boolean networks supplied with one controlling node, which takes continual values. We a...

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Detalles Bibliográficos
Autores principales: Lavrova, Anastasia I., Postnikov, Eugene B., Zyubin, Andrey Yu., Babak, Svetlana V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society Publishing 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5414245/
https://www.ncbi.nlm.nih.gov/pubmed/28484608
http://dx.doi.org/10.1098/rsos.160872
Descripción
Sumario:We consider two approaches to modelling the cell metabolism of 6-mercaptopurine, one of the important chemotherapy drugs used for treating acute lymphocytic leukaemia: kinetic ordinary differential equations, and Boolean networks supplied with one controlling node, which takes continual values. We analyse their interplay with respect to taking into account ATP concentration as a key parameter of switching between different pathways. It is shown that the Boolean networks, which allow avoiding the complexity of general kinetic modelling, preserve the possibility of reproducing the principal switching mechanism.