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DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer

Sporadic colorectal cancer (CRC) is classified into several molecular subtypes. We previously established two groups of DNA methylation markers through genome‐wide DNA methylation analysis to classify CRC into distinct subgroups: high‐, intermediate‐, and low‐methylation epigenotypes (HME, IME, and...

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Autores principales: Takane, Kiyoko, Akagi, Kiwamu, Fukuyo, Masaki, Yagi, Koichi, Takayama, Tadatoshi, Kaneda, Atsushi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5430106/
https://www.ncbi.nlm.nih.gov/pubmed/28378457
http://dx.doi.org/10.1002/cam4.1061
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author Takane, Kiyoko
Akagi, Kiwamu
Fukuyo, Masaki
Yagi, Koichi
Takayama, Tadatoshi
Kaneda, Atsushi
author_facet Takane, Kiyoko
Akagi, Kiwamu
Fukuyo, Masaki
Yagi, Koichi
Takayama, Tadatoshi
Kaneda, Atsushi
author_sort Takane, Kiyoko
collection PubMed
description Sporadic colorectal cancer (CRC) is classified into several molecular subtypes. We previously established two groups of DNA methylation markers through genome‐wide DNA methylation analysis to classify CRC into distinct subgroups: high‐, intermediate‐, and low‐methylation epigenotypes (HME, IME, and LME, respectively). HME CRC, also called CpG island methylator phenotype (CIMP)‐high CRC, shows methylation of both Group 1 markers (CIMP markers) and Group 2 markers, while IME/CIMP‐low CRC shows methylation of Group 2, but not of Group 1 markers, and LME CRC shows no methylation of either Group 1 or Group 2 markers. While BRAF‐ and KRAS‐mutation(+) CRC strongly correlated with HME and IME, respectively, clinicopathological features of NRAS‐mutation(+) CRC, including association with DNA methylation, remain unclear. To characterize NRAS‐mutation(+) CRC, the methylation levels of 19 methylation marker genes (6 Group 1 and 13 Group 2) were analyzed in 61 NRAS‐mutation(+) and 144 NRAS‐mutation(−) CRC cases by pyrosequencing, and their correlation with clinicopathological features was investigated. Different from KRAS‐mutation(+) CRC,NRAS‐mutation(+) CRC significantly correlated with LME. NRAS‐mutation(+) CRC showed significantly better prognosis than KRAS‐mutation(+) CRC (P = 3 × 10(−4)). NRAS‐mutation(+) CRC preferentially occurred in elder patients (P = 0.02) and at the distal colon (P = 0.006), showed significantly less lymph vessel invasion (P = 0.002), and correlated with LME (P = 8 × 10(−5)). DNA methylation significantly accumulated at the proximal colon. NRAS‐mutation(+) CRC may constitute a different subgroup from KRAS‐mutation(+) CRC, showing significant correlation with LME, older age, distal colon, and relatively better prognosis.
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spelling pubmed-54301062017-05-17 DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer Takane, Kiyoko Akagi, Kiwamu Fukuyo, Masaki Yagi, Koichi Takayama, Tadatoshi Kaneda, Atsushi Cancer Med Clinical Cancer Research Sporadic colorectal cancer (CRC) is classified into several molecular subtypes. We previously established two groups of DNA methylation markers through genome‐wide DNA methylation analysis to classify CRC into distinct subgroups: high‐, intermediate‐, and low‐methylation epigenotypes (HME, IME, and LME, respectively). HME CRC, also called CpG island methylator phenotype (CIMP)‐high CRC, shows methylation of both Group 1 markers (CIMP markers) and Group 2 markers, while IME/CIMP‐low CRC shows methylation of Group 2, but not of Group 1 markers, and LME CRC shows no methylation of either Group 1 or Group 2 markers. While BRAF‐ and KRAS‐mutation(+) CRC strongly correlated with HME and IME, respectively, clinicopathological features of NRAS‐mutation(+) CRC, including association with DNA methylation, remain unclear. To characterize NRAS‐mutation(+) CRC, the methylation levels of 19 methylation marker genes (6 Group 1 and 13 Group 2) were analyzed in 61 NRAS‐mutation(+) and 144 NRAS‐mutation(−) CRC cases by pyrosequencing, and their correlation with clinicopathological features was investigated. Different from KRAS‐mutation(+) CRC,NRAS‐mutation(+) CRC significantly correlated with LME. NRAS‐mutation(+) CRC showed significantly better prognosis than KRAS‐mutation(+) CRC (P = 3 × 10(−4)). NRAS‐mutation(+) CRC preferentially occurred in elder patients (P = 0.02) and at the distal colon (P = 0.006), showed significantly less lymph vessel invasion (P = 0.002), and correlated with LME (P = 8 × 10(−5)). DNA methylation significantly accumulated at the proximal colon. NRAS‐mutation(+) CRC may constitute a different subgroup from KRAS‐mutation(+) CRC, showing significant correlation with LME, older age, distal colon, and relatively better prognosis. John Wiley and Sons Inc. 2017-04-04 /pmc/articles/PMC5430106/ /pubmed/28378457 http://dx.doi.org/10.1002/cam4.1061 Text en © 2017 The Authors. Cancer Medicine published by John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Clinical Cancer Research
Takane, Kiyoko
Akagi, Kiwamu
Fukuyo, Masaki
Yagi, Koichi
Takayama, Tadatoshi
Kaneda, Atsushi
DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer
title DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer
title_full DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer
title_fullStr DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer
title_full_unstemmed DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer
title_short DNA methylation epigenotype and clinical features of NRAS‐mutation(+) colorectal cancer
title_sort dna methylation epigenotype and clinical features of nras‐mutation(+) colorectal cancer
topic Clinical Cancer Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5430106/
https://www.ncbi.nlm.nih.gov/pubmed/28378457
http://dx.doi.org/10.1002/cam4.1061
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