EvDTree: structure-dependent substitution profiles based on decision tree classification of 3D environments

BACKGROUND: Structure-dependent substitution matrices increase the accuracy of sequence alignments when the 3D structure of one sequence is known, and are successful e.g. in fold recognition. We propose a new automated method, EvDTree, based on a decision tree algorithm, for automatic derivation of...

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Detalles Bibliográficos
Autores principales: Gelly, Jean-Christophe, Chiche, Laurent, Gracy, Jérôme
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2005
Materias:
Methodology Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC545998/
https://www.ncbi.nlm.nih.gov/pubmed/15638949
http://dx.doi.org/10.1186/1471-2105-6-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC545998/
https://www.ncbi.nlm.nih.gov/pubmed/15638949
http://dx.doi.org/10.1186/1471-2105-6-4

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