Estimating Phred scores of Illumina base calls by logistic regression and sparse modeling

BACKGROUND: Phred quality scores are essential for downstream DNA analysis such as SNP detection and DNA assembly. Thus a valid model to define them is indispensable for any base-calling software. Recently, we developed the base-caller 3Dec for Illumina sequencing platforms, which reduces base-calli...

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Detalles Bibliográficos
Autores principales: Zhang, Sheng, Wang, Bo, Wan, Lin, Li, Lei M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Research Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5504792/
https://www.ncbi.nlm.nih.gov/pubmed/28697757
http://dx.doi.org/10.1186/s12859-017-1743-4

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5504792/
https://www.ncbi.nlm.nih.gov/pubmed/28697757
http://dx.doi.org/10.1186/s12859-017-1743-4

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